RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PTPRFP10586 1907 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 PNMA6FA0A0J9YX94 578 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 PLEKHA8P1O95397 391 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 XRCC5P13010 732 aaKnown RBP17.73■□□□□ 0.43
CCS-206ENST00000530961 ALAS1P13196 640 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 RGS2P41220 211 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 MAP2K5Q13163 448 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 RABEP1Q15276 862 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 SLC35G1Q2M3R5 365 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 QRICH1Q2TAL8 776 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 FBXO11Q86XK2 927 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 USP6NLQ92738 828 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 ARMC5Q96C12 935 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 RRP36Q96EU6 259 aaKnown RBP17.73■□□□□ 0.43
CCS-206ENST00000530961 MMP19Q99542 508 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 AMNQ9BXJ7 453 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 MAF1Q9H063 256 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 ACAD9Q9H845 621 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 RNF146Q9NTX7 359 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 FAM217BQ9NTX9 383 aaPredicted RBP17.73■□□□□ 0.43
CCS-206ENST00000530961 GABRQQ9UN88 632 aa17.73■□□□□ 0.43
CCS-206ENST00000530961 NID2Q14112 1375 aa17.72■□□□□ 0.43
CCS-206ENST00000530961 HOXC6P09630 235 aa17.72■□□□□ 0.43
CCS-206ENST00000530961 ADORA2AP29274 412 aa17.72■□□□□ 0.43
CCS-206ENST00000530961 AK2P54819 239 aa17.72■□□□□ 0.43
CCS-206ENST00000530961 TRMT44Q8IYL2 757 aaKnown RBP17.72■□□□□ 0.43
CCS-206ENST00000530961 PXYLP1Q8TE99 480 aa17.72■□□□□ 0.43
CCS-206ENST00000530961 PIGSQ96S52 555 aa17.72■□□□□ 0.43
CCS-206ENST00000530961 HOMER2Q9NSB8 354 aa17.72■□□□□ 0.43
CCS-206ENST00000530961 SEC63Q9UGP8 760 aaKnown RBP17.72■□□□□ 0.43
CCS-206ENST00000530961 MYH8P13535 1937 aa17.71■□□□□ 0.43
CCS-206ENST00000530961 CDC27P30260 824 aa17.71■□□□□ 0.43
CCS-206ENST00000530961 DPP9Q86TI2 863 aa17.71■□□□□ 0.43
CCS-206ENST00000530961 HOMER1Q86YM7 354 aa17.71■□□□□ 0.43
CCS-206ENST00000530961 ANKRD35Q8N283 1001 aa17.71■□□□□ 0.43
CCS-206ENST00000530961 RGS22Q8NE09 1264 aa17.71■□□□□ 0.43
CCS-206ENST00000530961 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
CCS-206ENST00000530961 MRPL11Q9Y3B7 192 aaKnown RBP17.71■□□□□ 0.43
CCS-206ENST00000530961 PTCH2Q9Y6C5 1203 aa17.71■□□□□ 0.43
CCS-206ENST00000530961 ABCB11O95342 1321 aa17.71■□□□□ 0.42
CCS-206ENST00000530961 CYP2B6P20813 491 aa17.7■□□□□ 0.42
CCS-206ENST00000530961 ADD1P35611 737 aaKnown RBP17.7■□□□□ 0.42
CCS-206ENST00000530961 FUT2Q10981 343 aa17.7■□□□□ 0.42
CCS-206ENST00000530961 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
CCS-206ENST00000530961 SLAIN1Q8ND83 568 aa17.7■□□□□ 0.42
CCS-206ENST00000530961 APBA2Q99767 749 aa17.7■□□□□ 0.42
CCS-206ENST00000530961 LARP6Q9BRS8 491 aaKnown RBP17.7■□□□□ 0.42
CCS-206ENST00000530961 PRDM6Q9NQX0 595 aa17.7■□□□□ 0.42
CCS-206ENST00000530961 TPCN1Q9ULQ1 816 aa17.7■□□□□ 0.42
CCS-206ENST00000530961 DIS3Q9Y2L1 958 aaKnown RBP17.7■□□□□ 0.42
CCS-206ENST00000530961 PCDHA1Q9Y5I3 950 aa17.7■□□□□ 0.42
CCS-206ENST00000530961 ADCY3O60266 1144 aa17.69■□□□□ 0.42
CCS-206ENST00000530961 USH1GQ495M9 461 aa17.69■□□□□ 0.42
CCS-206ENST00000530961 MUM1L1Q5H9M0 696 aa17.69■□□□□ 0.42
CCS-206ENST00000530961 CPLX2Q6PUV4 134 aaKnown RBP17.69■□□□□ 0.42
CCS-206ENST00000530961 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
CCS-206ENST00000530961 CCDC82Q8N4S0 544 aa17.69■□□□□ 0.42
CCS-206ENST00000530961 CLEC4DQ8WXI8 215 aa17.69■□□□□ 0.42
CCS-206ENST00000530961 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
CCS-206ENST00000530961 PFASO15067 1338 aa17.69■□□□□ 0.42
CCS-206ENST00000530961 DNAJC25-GNG10A0A024R161 153 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 A0A1W2PPC1 479 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 CPLX1O14810 134 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 ST18O60284 1047 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 PFKFB2O60825 505 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 PPP1R11O60927 126 aaPredicted RBP17.68■□□□□ 0.42
CCS-206ENST00000530961 COBLO75128 1261 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 GRK4P32298 578 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
CCS-206ENST00000530961 SLC9C1Q4G0N8 1177 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 PIBF1Q8WXW3 757 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 A1CFQ9NQ94 594 aaKnown RBP17.68■□□□□ 0.42
CCS-206ENST00000530961 LIMCH1Q9UPQ0 1083 aa17.68■□□□□ 0.42
CCS-206ENST00000530961 V9GY48 417 aaPredicted RBP17.68■□□□□ 0.42
CCS-206ENST00000530961 CENPFP49454 3210 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 NFIBO00712 420 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 IFNAR1P17181 557 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 AKAP17AQ02040 695 aaKnown RBP17.67■□□□□ 0.42
CCS-206ENST00000530961 NTRK3Q16288 839 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 ZNF792Q3KQV3 632 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 OLFML2BQ68BL8 750 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 NSMFQ6X4W1 530 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 SAMD3Q8N6K7 520 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 MAP3K20Q9NYL2 800 aaKnown RBP17.67■□□□□ 0.42
CCS-206ENST00000530961 CYP39A1Q9NYL5 469 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 CNTNAP5Q8WYK1 1306 aa17.67■□□□□ 0.42
CCS-206ENST00000530961 POTEB2H3BUK9 544 aa17.66■□□□□ 0.42
CCS-206ENST00000530961 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
CCS-206ENST00000530961 CDKL5O76039 1030 aa17.66■□□□□ 0.42
CCS-206ENST00000530961 PGK2P07205 417 aa17.66■□□□□ 0.42
CCS-206ENST00000530961 TAL1P17542 331 aaPredicted RBP17.66■□□□□ 0.42
CCS-206ENST00000530961 STK3Q13188 491 aa17.66■□□□□ 0.42
CCS-206ENST00000530961 RNF207Q6ZRF8 634 aa17.66■□□□□ 0.42
CCS-206ENST00000530961 ZNF467Q7Z7K2 595 aaPredicted RBP17.66■□□□□ 0.42
CCS-206ENST00000530961 MSL3Q8N5Y2 521 aaKnown RBP17.66■□□□□ 0.42
CCS-206ENST00000530961 NPLOC4Q8TAT6 608 aa17.66■□□□□ 0.42
CCS-206ENST00000530961 DPF3Q92784 378 aa17.66■□□□□ 0.42
CCS-206ENST00000530961 NCOA5Q9HCD5 579 aaKnown RBP17.66■□□□□ 0.42
CCS-206ENST00000530961 STXBP5LQ9Y2K9 1186 aa17.66■□□□□ 0.42
CCS-206ENST00000530961 BRCA2P51587 3418 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms