RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 DIAPH2O60879 1101 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 RANBP1P43487 201 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 FOSBP53539 338 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 ANKRD20A2Q5SQ80 823 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CCDC122Q5T0U0 273 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 HDGFL1Q5TGJ6 251 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 ANKRD20A1Q5TYW2 823 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 ANKRD20A3Q5VUR7 823 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 OTUD7BQ6GQQ9 843 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 ZNF579Q8NAF0 562 aaKnown RBP9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CFAP61Q8NHU2 1237 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 IFT43Q96FT9 208 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CAPZA3Q96KX2 299 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 DSCC1Q9BVC3 393 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-214ENST00000530886 BOLA2Q9H3K6 86 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 ZWILCHQ9H900 591 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 TRIM10Q9UDY6 481 aa9.01□□□□□ -0.97
CSDE1-214ENST00000530886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.01□□□□□ -0.97
CSDE1-214ENST00000530886 ADAMTS13Q76LX8 1427 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 DPPA5A6NC42 116 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 E7EWF7 191 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 GNAQP50148 359 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 PPP1R15BQ5SWA1 713 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 TRMT44Q8IYL2 757 aaKnown RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 CPLX3Q8WVH0 158 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 TEKT4Q8WW24 435 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.971e-6■■■■■ 139.3
CSDE1-214ENST00000530886 MYH1P12882 1939 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 AFF2P51816 1311 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 SYNRGQ9UMZ2 1314 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 FMNL1O95466 1100 aaPredicted RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 BAG3O95817 575 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 TCP1P17987 556 aaKnown RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 KIF5BP33176 963 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 SPAG1Q07617 926 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 EZH2Q15910 746 aaKnown RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 TTC39AQ5SRH9 613 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 NAF1Q96HR8 494 aaKnown RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 HAUS7Q99871 368 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 PPANQ9NQ55 473 aaKnown RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 RNF14Q9UBS8 474 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 L3MBTL1Q9Y468 752 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 ATAD5Q96QE3 1844 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 ACEP12821 1306 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 F8W031 263 aaPredicted RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 H0YGN5 161 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 ZNF185O15231 689 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 PRC1O43663 620 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 A1BGP04217 495 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 MYL1P05976 194 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 NQO1P15559 274 aaKnown RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 MARCKSP29966 332 aaPredicted RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 MCMDC2Q4G0Z9 681 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 CCDC178Q5BJE1 867 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 RRP12Q5JTH9 1297 aaKnown RBP9□□□□□ -0.97
CSDE1-214ENST00000530886 ARMC3Q5W041 872 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 PIGWQ7Z7B1 504 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 PANK4Q9NVE7 773 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 NFS1Q9Y697 457 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 KIF1AQ12756 1690 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 CASZ1Q86V15 1759 aa9□□□□□ -0.97
CSDE1-214ENST00000530886 MYH10P35580 1976 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 FLOT1O75955 427 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 ZNF131P52739 623 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 ANTXR2P58335 489 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 CDK17Q00537 523 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 PDIA6Q15084 440 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 HSP90AA4PQ58FG1 418 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 FBXO31Q5XUX0 539 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 STK11IPQ8N1F8 1099 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 CCDC197Q8NCU1 140 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 RAPGEF5Q92565 580 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 RBM33Q96EV2 1170 aaKnown RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 CNOT10Q9H9A5 744 aaKnown RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 GPHNQ9NQX3 736 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 CEP131Q9UPN4 1083 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 A0A1W2PQC6 194 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 N4BP3O15049 544 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 IDEP14735 1019 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 ATP2A2P16615 1042 aaKnown RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 TPP2P29144 1249 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 PPP2R2AP63151 447 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 PROSER3Q2NL68 480 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 ANO7Q6IWH7 933 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 ANKS4BQ8N8V4 417 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 LZICQ8WZA0 190 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 C2CD2Q9Y426 696 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 WDR19Q8NEZ3 1342 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 KCNQ3O43525 872 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 CREB3O43889 395 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 KRT9P35527 623 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 DEUP1Q05D60 604 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 GNPTABQ3T906 1256 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 ACBD5Q5T8D3 534 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 RUFY4Q6ZNE9 571 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 KRI1Q8N9T8 703 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms