RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 TMTC1Q8IUR5 882 aa9.73□□□□□ -0.85
CAPRIN1-209ENST00000530820 SLC35B4Q969S0 331 aa9.73□□□□□ -0.85
CAPRIN1-209ENST00000530820 TMEM237Q96Q45 408 aa9.73□□□□□ -0.85
CAPRIN1-209ENST00000530820 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
CAPRIN1-209ENST00000530820 ESF1Q9H501 851 aaKnown RBP9.73□□□□□ -0.85
CAPRIN1-209ENST00000530820 EBF2Q9HAK2 575 aa9.73□□□□□ -0.85
CAPRIN1-209ENST00000530820 PALM3A6NDB9 673 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 A6NHS1 94 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 OR6B1O95007 311 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 VWA3BQ502W6 1294 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 VSTM4Q8IW00 320 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 DCLK2Q8N568 766 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 RNF10Q8N5U6 811 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 PDCD7Q8N8D1 485 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 JDP2Q8WYK2 163 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 MS4A14Q96JA4 679 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 CHP1Q99653 195 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 VCXQ9H320 206 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 EPB41L5Q9HCM4 733 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 PCDHA7Q9UN72 937 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 USP20Q9Y2K6 914 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 SAR1BQ9Y6B6 198 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 GON4LQ3T8J9 2241 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 RGS12O14924 1447 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 MSH6P52701 1360 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 FLOT1O75955 427 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 TMED10P49755 219 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 POLR2FP61218 127 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 MKRN4PQ13434 485 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 SHROOM1Q2M3G4 852 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 CYP26C1Q6V0L0 522 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 RIBC1Q8N443 379 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 C8orf58Q8NAV2 365 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 SMC1BQ8NDV3 1235 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 SUPT20HQ8NEM7 779 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 TTC8Q8TAM2 541 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 SREK1Q8WXA9 508 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 HDAC2Q92769 488 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 SEL1LQ9UBV2 794 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 CFAP65Q6ZU64 1925 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 NUTM2FA1L443 756 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 AKR1B15C9JRZ8 316 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 TXNDC9O14530 226 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 LUC7L3O95232 432 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 OXCT1P55809 520 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 PDE4BQ07343 736 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 IFFO1Q0D2I5 559 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 DYNC1I2Q13409 638 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 PRKG1Q13976 671 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 EXOC3L1Q86VI1 746 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 DEPDC4Q8N2C3 294 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 ATP6V0A1Q93050 837 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 SH3GL2Q99962 352 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 DHX36Q9H2U1 1008 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 INTS13Q9NVM9 706 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 PHF24Q9UPV7 400 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 U3KPZ7 1027 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 LAMC3Q9Y6N6 1575 aa9.72□□□□□ -0.85
CAPRIN1-209ENST00000530820 H7C1W4 665 aa9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 USO1O60763 962 aaKnown RBP9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 DKC1O60832 514 aaKnown RBP eCLIP9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 ZKSCAN1P17029 563 aaPredicted RBP9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 MTTPP55157 894 aa9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 MAGOHP61326 146 aaKnown RBP9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 TWISTNBQ3B726 338 aaPredicted RBP9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 CEP85Q6P2H3 762 aa9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 RAPGEF5Q92565 580 aa9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 MAGOHBQ96A72 148 aaKnown RBP9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 ATAD3AQ9NVI7 634 aa9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 CLIC4Q9Y696 253 aa9.71□□□□□ -0.85
CAPRIN1-209ENST00000530820 TTC21BQ7Z4L5 1316 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 ZNF233A6NK53 670 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 CBFA2T2O43439 604 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 ENTPD5O75356 428 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 PCSK7Q16549 785 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 FAM182AQ5T1J6 154 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 RUFY4Q6ZNE9 571 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 NEK10Q6ZWH5 1172 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 SPATA24Q86W54 205 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 MRPS27Q92552 414 aaKnown RBP9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 NUDCD1Q96RS6 583 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 MTFR1LQ9H019 292 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 CCDC87Q9NVE4 849 aa9.71□□□□□ -0.86
CAPRIN1-209ENST00000530820 RAD54L2Q9Y4B4 1467 aa9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 LINC00854A0A1B0GVQ3 168 aa9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 CYTH3O43739 400 aa9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 CDC27P30260 824 aa9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 ADARP55265 1226 aaKnown RBP9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 MYL5Q02045 173 aa9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 ITIH3Q06033 890 aa9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 KYNUQ16719 465 aa9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 SPECC1LQ69YQ0 1117 aa9.7□□□□□ -0.86
CAPRIN1-209ENST00000530820 CCDC197Q8NCU1 140 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms