RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 ZNF408Q9H9D4 720 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 LPXNO60711 386 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 FMNL1O95466 1100 aaPredicted RBP16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 IFT88Q13099 833 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 LRRC24Q50LG9 513 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 TTC19Q6DKK2 380 aaPredicted RBP16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 KIFC2Q96AC6 838 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 ANKARQ7Z5J8 1434 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 SOS2Q07890 1332 aaPredicted RBP16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 CLTAP09496 248 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 TECP42680 631 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 PI4K2BQ8TCG2 481 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 EFCC1Q9HA90 598 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 HAUS2Q9NVX0 235 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 RFX1P22670 979 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 EHHADHQ08426 723 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 HINFPQ9BQA5 517 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 AZI2Q9H6S1 392 aa16.93■□□□□ 0.3
PCDHA4-203ENST00000530339 SOWAHDA6NJG2 315 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 PSMD1Q99460 953 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 PKD2L1Q9P0L9 805 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 SLAIN2Q9P270 581 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 MRPL11Q9Y3B7 192 aaKnown RBP16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 JRKLQ9Y4A0 524 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 TNFAIP1Q13829 316 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 PPP1R21Q6ZMI0 780 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 FNBP4Q8N3X1 1017 aaPredicted RBP16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 KRT12Q99456 494 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 VPS37BQ9H9H4 285 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 RNF14Q9UBS8 474 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 IL6STP40189 918 aaPredicted RBP16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 MUM1Q2TAK8 710 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 PHLDB3Q6NSJ2 640 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 GPBP1Q86WP2 473 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 DHTKD1Q96HY7 919 aaPredicted RBP16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 COL4A3BPQ9Y5P4 624 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 TPD52P55327 224 aaPredicted RBP16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 ITIH3Q06033 890 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 PTPN21Q16825 1174 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 DCUN1D2Q6PH85 259 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 ACRBPQ8NEB7 543 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 MIS12Q9H081 205 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 SLC39A2Q9NP94 309 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 HECW2Q9P2P5 1572 aa16.92■□□□□ 0.3
PCDHA4-203ENST00000530339 GAS7O60861 476 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 ZMYND10O75800 440 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 RASSF7Q02833 373 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 ARID5BQ14865 1188 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 GPR162Q16538 588 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 USTQ9Y2C2 406 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 HEXIM1O94992 359 aaKnown RBP16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 CCDC197Q8NCU1 140 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 SAMSN1Q9NSI8 373 aaKnown RBP16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 IQGAP3Q86VI3 1631 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 KIF3CO14782 793 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 ATP1A3P13637 1013 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 KIF22Q14807 665 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 BBOF1Q8ND07 529 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 TBC1D31Q96DN5 1066 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 ABCB6Q9NP58 842 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 FAM98CQ17RN3 349 aaKnown RBP16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 PCDHA12Q9UN75 941 aa16.91■□□□□ 0.3
PCDHA4-203ENST00000530339 POLA2Q14181 598 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 FAM26FQ5R3K3 315 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 MCF2L2Q86YR7 1114 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 CCDC17Q96LX7 622 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 ARMC9Q7Z3E5 817 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 ARHGEF25Q86VW2 580 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 AS3MTQ9HBK9 375 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 EPB41L5Q9HCM4 733 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 ABCC12Q96J65 1359 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 NOP56O00567 594 aaKnown RBP16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 GMNNO75496 209 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 LUC7L3O95232 432 aaKnown RBP16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 GNPTABQ3T906 1256 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 PPP1R2P3Q6NXS1 205 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 LEMD3Q9Y2U8 911 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 GBP5Q96PP8 586 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 USP40Q9NVE5 1235 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 ADAM21Q9UKJ8 722 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 KLRF2D3W0D1 207 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 GCFC2P16383 781 aaKnown RBP16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 LTKP29376 864 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 ASPRV1Q53RT3 343 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 ZNF658Q5TYW1 1059 aaPredicted RBP16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 FAM114A2Q9NRY5 505 aa16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 TYW1Q9NV66 732 aaKnown RBP16.9■□□□□ 0.3
PCDHA4-203ENST00000530339 SUN1O94901 812 aa16.89■□□□□ 0.29
PCDHA4-203ENST00000530339 MFSD14BQ5SR56 506 aa16.89■□□□□ 0.29
PCDHA4-203ENST00000530339 GPATCH4Q5T3I0 446 aaKnown RBP16.89■□□□□ 0.29
PCDHA4-203ENST00000530339 MIER3Q7Z3K6 550 aa16.89■□□□□ 0.29
PCDHA4-203ENST00000530339 SMYD4Q8IYR2 804 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms