RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CPA1P15085 419 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 CCND3P30281 292 aaPredicted RBP14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 SLC35G1Q2M3R5 365 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 QRICH1Q2TAL8 776 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 MAMDC4Q6UXC1 1216 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 ZNF467Q7Z7K2 595 aaPredicted RBP14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 MSL3Q8N5Y2 521 aaKnown RBP14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 FAM133AQ8N9E0 248 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 TRPV1Q8NER1 839 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 CTCFLQ8NI51 663 aaPredicted RBP14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 CLEC4DQ8WXI8 215 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 SHISA4Q96DD7 197 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 TCEANC2Q96MN5 208 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 JAKMIP1Q96N16 626 aaKnown RBP14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 TINF2Q9BSI4 451 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 MYL10Q9BUA6 226 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 CRISPLD2Q9H0B8 497 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 RIOX1Q9H6W3 641 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 CYP39A1Q9NYL5 469 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 SLC12A7Q9Y666 1083 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 NFIBO00712 420 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 CYTH3O43739 400 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 TFRCP02786 760 aaKnown RBP14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 CYBAP13498 195 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 PSMA5P28066 241 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 KIF5BP33176 963 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 CNTN2Q02246 1040 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 MLLT1Q03111 559 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 PRAMEF19Q5SWL8 479 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 BLOC1S2Q6QNY1 142 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 NSMFQ6X4W1 530 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 FGD4Q96M96 766 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 NRBP1Q9UHY1 535 aa14.74□□□□□ -0.05
CCDC90B-216ENST00000529856 ABCB11O95342 1321 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 MYH6P13533 1939 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 ZBTB5O15062 677 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 SMARCA1P28370 1054 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 BAATQ14032 418 aaPredicted RBP14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 USH1GQ495M9 461 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 LHX8Q68G74 356 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 SYNE3Q6ZMZ3 975 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 FBXO11Q86XK2 927 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 FANCBQ8NB91 859 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 RGS22Q8NE09 1264 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 LZTS2Q9BRK4 669 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 AMNQ9BXJ7 453 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 BRPF3Q9ULD4 1205 aa14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 BAZ2BQ9UIF8 2168 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-216ENST00000529856 SYNGAP1Q96PV0 1343 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 SOWAHBA6NEL2 793 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 EIF5BO60841 1220 aaKnown RBP14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 SNAI1O95863 264 aaPredicted RBP14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 RXRAP19793 462 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 CASTP20810 708 aaKnown RBP14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 RPS6KB1P23443 525 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 CNGA1P29973 690 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 GNAQP50148 359 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 APOA5Q6Q788 366 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 FBXL16Q8N461 479 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 PIGSQ96S52 555 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 SPZ1Q9BXG8 430 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 MAF1Q9H063 256 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 OGDHLQ9ULD0 1010 aa14.72□□□□□ -0.05
CCDC90B-216ENST00000529856 PNMA6FA0A0J9YX94 578 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 PTPDC1A2A3K4 754 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 ASB14A6NK59 587 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 SEPT4O43236 478 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 MSCO60682 206 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 PPP1R11O60927 126 aaPredicted RBP14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 ZNF865P0CJ78 1059 aaPredicted RBP14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 FGD1P98174 961 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 RNF207Q6ZRF8 634 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 Q6ZUG5 572 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 HOMER1Q86YM7 354 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 RAB11FIP4Q86YS3 637 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 CCDC144CPQ8IYA2 1237 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 SRBD1Q8N5C6 995 aaKnown RBP14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 TM6SF1Q9BZW5 370 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 DDX20Q9UHI6 824 aaKnown RBP14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 CNPY2Q9Y2B0 182 aa14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 MRPL11Q9Y3B7 192 aaKnown RBP14.71□□□□□ -0.05
CCDC90B-216ENST00000529856 ASTN1O14525 1302 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 KLF18A0A0U1RQI7 1052 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 ZBTB43O43298 467 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 PLEKHA8P1O95397 391 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 RPS6P62753 249 aaKnown RBP14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 TRAF1Q13077 416 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 SLC30A10Q6XR72 485 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 RUFY3Q7L099 469 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 ARMCX2Q7L311 632 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 UBE2Q1Q7Z7E8 422 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 MICU3Q86XE3 530 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 MCF2L2Q86YR7 1114 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 ANKLE1Q8NAG6 615 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 TBC1D5Q92609 795 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 PURBQ96QR8 312 aaKnown RBP14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 AGXT2Q9BYV1 514 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms