RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 ATP13A1Q9HD20 1204 aa5.64□□□□□ -1.51
SVIP-203ENST00000529848 NDOR1Q9UHB4 597 aa5.64□□□□□ -1.51
SVIP-203ENST00000529848 SFMBT1Q9UHJ3 866 aa5.64□□□□□ -1.51
SVIP-203ENST00000529848 VAV3Q9UKW4 847 aa5.64□□□□□ -1.51
SVIP-203ENST00000529848 PCDHA11Q9Y5I1 949 aa5.64□□□□□ -1.51
SVIP-203ENST00000529848 BLACEA4D250 179 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 MEFVO15553 781 aaPredicted RBP5.63□□□□□ -1.51
SVIP-203ENST00000529848 ADAM23O75077 832 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 IBSPP21815 317 aaPredicted RBP5.63□□□□□ -1.51
SVIP-203ENST00000529848 IKZF1Q13422 519 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 SLC35F1Q5T1Q4 408 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 INTS5Q6P9B9 1019 aaKnown RBP5.63□□□□□ -1.51
SVIP-203ENST00000529848 STK11IPQ8N1F8 1099 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 PTPRN2Q92932 1015 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 MFSD3Q96ES6 412 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 C1orf159Q96HA4 380 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 GPRC5CQ9NQ84 441 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
SVIP-203ENST00000529848 TRBV23OR9-2A0A075B6M9 112 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 IRS4O14654 1257 aaPredicted RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 ESR1P03372 595 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 HMGB1P09429 215 aaKnown RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 C6orf222P0C671 652 aaPredicted RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 PAMP19021 973 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 RPL10P27635 214 aaKnown RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 TRIM61Q5EBN2 209 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 RTP2Q5QGT7 225 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 ACBD5Q5T8D3 534 aaPredicted RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 E4F1Q66K89 784 aaPredicted RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 MAMDC2Q7Z304 686 aaPredicted RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 WAPLQ7Z5K2 1190 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 DHX37Q8IY37 1157 aaKnown RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 ZCRB1Q8TBF4 217 aaKnown RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 FRS2Q8WU20 508 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 DCAF4Q8WV16 495 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 BSDC1Q9NW68 430 aaPredicted RBP5.62□□□□□ -1.51
SVIP-203ENST00000529848 IFT57Q9NWB7 429 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 CLEC1BQ9P126 229 aa5.62□□□□□ -1.51
SVIP-203ENST00000529848 AQP7O14520 342 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 FGF10O15520 208 aaPredicted RBP5.61□□□□□ -1.51
SVIP-203ENST00000529848 COBLO75128 1261 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 TBC1D8O95759 1140 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 PLS3P13797 630 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 TEKQ02763 1124 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 CYP4F3Q08477 520 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 KCNAB2Q13303 367 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 NTRK3Q16288 839 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 PTPROQ16827 1216 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 IQCEQ6IPM2 695 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 CYP2R1Q6VVX0 501 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 KREMEN2Q8NCW0 462 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 NPLOC4Q8TAT6 608 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 DIO2Q92813 273 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 CLUHP3Q96NS8 147 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 SLC52A2Q9HAB3 445 aa5.61□□□□□ -1.51
SVIP-203ENST00000529848 NPHP3-ACAD11A0A0J9YXS1 232 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 PPM1GO15355 546 aaPredicted RBP5.6□□□□□ -1.51
SVIP-203ENST00000529848 NAT1P18440 290 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 LTBRP36941 435 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 MASP1P48740 699 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 BNIP3Q12983 259 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 TM4SF20Q53R12 229 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 ANGEL2Q5VTE6 544 aaKnown RBP5.6□□□□□ -1.51
SVIP-203ENST00000529848 STYK1Q6J9G0 422 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 RSPO2Q6UXX9 243 aaPredicted RBP5.6□□□□□ -1.51
SVIP-203ENST00000529848 BRAPQ7Z569 592 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 MTDHQ86UE4 582 aaKnown RBP5.6□□□□□ -1.51
SVIP-203ENST00000529848 ANKRD13AQ8IZ07 590 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 SLC7A14Q8TBB6 771 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 FCRL2Q96LA5 508 aaPredicted RBP5.6□□□□□ -1.51
SVIP-203ENST00000529848 PTCHD1Q96NR3 888 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 PHF20Q9BVI0 1012 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 CARS2Q9HA77 564 aaKnown RBP5.6□□□□□ -1.51
SVIP-203ENST00000529848 MAGEC2Q9UBF1 373 aaPredicted RBP5.6□□□□□ -1.51
SVIP-203ENST00000529848 SLC5A6Q9Y289 635 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 TRAF6Q9Y4K3 522 aa5.6□□□□□ -1.51
SVIP-203ENST00000529848 hCG_2014768A0A024R1R8 64 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 TMEM82A0PJX8 343 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 KCNQ2O43526 872 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 MYCLP1P12525 358 aaPredicted RBP5.59□□□□□ -1.51
SVIP-203ENST00000529848 HSP90B1P14625 803 aaKnown RBP5.59□□□□□ -1.51
SVIP-203ENST00000529848 LAPTM5Q13571 262 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 DENND5AQ6IQ26 1287 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 CNNM4Q6P4Q7 775 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 KCNT2Q6UVM3 1135 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 ZPBP2Q6X784 338 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 IFNL3Q8IZI9 196 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 GSTCDQ8NEC7 633 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 BCL7CQ8WUZ0 217 aaPredicted RBP5.59□□□□□ -1.51
SVIP-203ENST00000529848 MAGEB10Q96LZ2 347 aaPredicted RBP5.59□□□□□ -1.51
SVIP-203ENST00000529848 MMP19Q99542 508 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 ZFYVE21Q9BQ24 234 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 TRIM39Q9HCM9 518 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 GPR27Q9NS67 375 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 INTS7Q9NVH2 962 aaKnown RBP5.59□□□□□ -1.51
SVIP-203ENST00000529848 LMCD1Q9NZU5 365 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 TMEFF2Q9UIK5 374 aaPredicted RBP5.59□□□□□ -1.51
SVIP-203ENST00000529848 COL4A3BPQ9Y5P4 624 aa5.59□□□□□ -1.51
SVIP-203ENST00000529848 MYO1BO43795 1136 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms