RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 USH1GQ495M9 461 aa15.72■□□□□ 0.11
SMCO4-205ENST00000529714 NOM1Q5C9Z4 860 aaKnown RBP15.72■□□□□ 0.11
SMCO4-205ENST00000529714 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMCO4-205ENST00000529714 CHST13Q8NET6 341 aa15.72■□□□□ 0.11
SMCO4-205ENST00000529714 GPKOWQ92917 476 aaPredicted RBP eCLIP15.72■□□□□ 0.11
SMCO4-205ENST00000529714 MOV10L1Q9BXT6 1211 aaKnown RBP15.72■□□□□ 0.11
SMCO4-205ENST00000529714 GLT8D2Q9H1C3 349 aa15.72■□□□□ 0.11
SMCO4-205ENST00000529714 MROH8Q9H579 483 aa15.72■□□□□ 0.11
SMCO4-205ENST00000529714 CWC22Q9HCG8 908 aaKnown RBP15.72■□□□□ 0.11
SMCO4-205ENST00000529714 DAXXQ9UER7 740 aaPredicted RBP15.72■□□□□ 0.11
SMCO4-205ENST00000529714 CPA4Q9UI42 421 aa15.72■□□□□ 0.11
SMCO4-205ENST00000529714 ALAS1P13196 640 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 PDIA4P13667 645 aaKnown RBP15.71■□□□□ 0.11
SMCO4-205ENST00000529714 NAPAP54920 295 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 GHRHRQ02643 423 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 Q3C1V9 767 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 GALNT17Q6IS24 598 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 SAMD3Q8N6K7 520 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 COA7Q96BR5 231 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 AIFM3Q96NN9 605 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 ZMYND12Q9H0C1 365 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 RNF146Q9NTX7 359 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 RIPK3Q9Y572 518 aa15.71■□□□□ 0.11
SMCO4-205ENST00000529714 SMCHD1A6NHR9 2005 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 DTNBO60941 627 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 TRPA1O75762 1119 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 CALML3P27482 149 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 TRIM29Q14134 588 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 TYW1BQ6NUM6 668 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 MCF2L2Q86YR7 1114 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 FBXO18Q8NFZ0 1043 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 CLEC4DQ8WXI8 215 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 C8orf76Q96K31 380 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 TRERF1Q96PN7 1200 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 BEGAINQ9BUH8 593 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 ACAD9Q9H845 621 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 MAP3K20Q9NYL2 800 aaKnown RBP15.7■□□□□ 0.1
SMCO4-205ENST00000529714 VPS54Q9P1Q0 977 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 CEP350Q5VT06 3117 aa15.7■□□□□ 0.1
SMCO4-205ENST00000529714 PEX10O60683 326 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 ERCC3P19447 782 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 GNA11P29992 359 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 MAPK4P31152 587 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 LARP1BQ659C4 914 aaKnown RBP15.69■□□□□ 0.1
SMCO4-205ENST00000529714 NCAPG2Q86XI2 1143 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 JMYQ8N9B5 988 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 DAGLBQ8NCG7 672 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 BICD2Q8TD16 824 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 CUL5Q93034 780 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 SHISA4Q96DD7 197 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 IPO9Q96P70 1041 aaKnown RBP15.69■□□□□ 0.1
SMCO4-205ENST00000529714 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 C6orf50Q9HD87 102 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 RIC8AQ9NPQ8 531 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 WBP1LQ9NX94 342 aa15.69■□□□□ 0.1
SMCO4-205ENST00000529714 SMCO2A6NFE2 343 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 PIK3CDO00329 1044 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 OPLAHO14841 1288 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 TBC1D8O95759 1140 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 ADCY7P51828 1080 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 MRPL12P52815 198 aaKnown RBP15.68■□□□□ 0.1
SMCO4-205ENST00000529714 NLRP5P59047 1200 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 KRT40Q6A162 431 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 CCAR1Q8IX12 1150 aaKnown RBP15.68■□□□□ 0.1
SMCO4-205ENST00000529714 ABRAQ8N0Z2 381 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 PORCNQ9H237 461 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 R3HDMLQ9H3Y0 253 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 PSTPIP2Q9H939 334 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 HOMER2Q9NSB8 354 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 ZNF236Q9UL36 1845 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 PFASO15067 1338 aa15.68■□□□□ 0.1
SMCO4-205ENST00000529714 NFIBO00712 420 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 STRNO43815 780 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 MMP1P03956 469 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 TAL1P17542 331 aaPredicted RBP15.67■□□□□ 0.1
SMCO4-205ENST00000529714 SLC4A3P48751 1232 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 MUM1L1Q5H9M0 696 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 MCTP2Q6DN12 878 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 SPRYD3Q8NCJ5 442 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 BRMS1Q9HCU9 246 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 PCDHA4Q9UN74 947 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 MGAMO43451 1857 aa15.67■□□□□ 0.1
SMCO4-205ENST00000529714 PLXNB2O15031 1838 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 PCNTO95613 3336 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 H3BQV1 296 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 GCOM1H8Y6P7 765 aaPredicted RBP15.66■□□□□ 0.1
SMCO4-205ENST00000529714 GPR25O00155 361 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 POLR2MP0CAP2 368 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 FCER1AP12319 257 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 SYT1P21579 422 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 HSD17B4P51659 736 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 SP3Q02447 781 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMCO4-205ENST00000529714 NPY5RQ15761 445 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 IFFO2Q5TF58 517 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 EFCC1Q9HA90 598 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 A1CFQ9NQ94 594 aaKnown RBP15.66■□□□□ 0.1
SMCO4-205ENST00000529714 GJB4Q9NTQ9 266 aa15.66■□□□□ 0.1
SMCO4-205ENST00000529714 KCNJ14Q9UNX9 436 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms