RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 TSEN2Q8NCE0 465 aaKnown RBP15.84■□□□□ 0.13
USP48-213ENST00000529637 ANKIB1Q9P2G1 1089 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 KCNJ18B7U540 433 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 ZPR1O75312 459 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
USP48-213ENST00000529637 CCDC172P0C7W6 258 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 MATR3P43243 847 aaKnown RBP eCLIP15.84■□□□□ 0.131e-8■■■□□ 17.7
USP48-213ENST00000529637 ATP1A2P50993 1020 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 TFAP4Q01664 338 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 PPARDQ03181 441 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 KCNJ12Q14500 433 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
USP48-213ENST00000529637 TCP11X2Q5H9J9 407 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 KCTD16Q68DU8 428 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 CLEC4GQ6UXB4 293 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 SH3GL2Q99962 352 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 LRRC1Q9BTT6 524 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 HAUS4Q9H6D7 363 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 STX8Q9UNK0 236 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
USP48-213ENST00000529637 MACROD2A1Z1Q3 448 aa15.83■□□□□ 0.13
USP48-213ENST00000529637 SMCR8Q8TEV9 937 aaPredicted RBP15.83■□□□□ 0.13
USP48-213ENST00000529637 CD248Q9HCU0 757 aa15.83■□□□□ 0.13
USP48-213ENST00000529637 JADE2Q9NQC1 790 aa15.83■□□□□ 0.13
USP48-213ENST00000529637 TAF1P21675 1872 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 SHTN1A0MZ66 631 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 KIF5BP33176 963 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 FNTAP49354 379 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 CYP27A1Q02318 531 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 TXNRD3Q86VQ6 643 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 CNPY4Q8N129 248 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 DYNLL2Q96FJ2 89 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 GSDMAQ96QA5 445 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 MTRQ99707 1265 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 DOT1LQ8TEK3 1739 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 MYH6P13533 1939 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 XDHP47989 1333 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 TRIM49BA6NDI0 452 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 SEMA3EO15041 775 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 GNPATO15228 680 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 MCM3P25205 808 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 PRPF38AQ8NAV1 312 aaKnown RBP15.83■□□□□ 0.12
USP48-213ENST00000529637 FAM212AQ96EL1 285 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 PSMB7Q99436 277 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 EHD2Q9NZN4 543 aa15.83■□□□□ 0.12
USP48-213ENST00000529637 CCDC194A0A1B0GVG4 234 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 IBSPP21815 317 aaPredicted RBP15.82■□□□□ 0.12
USP48-213ENST00000529637 STAT6P42226 847 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 FAM184BQ9ULE4 1060 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 GDAQ9Y2T3 454 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 MYH14Q7Z406 1995 aaKnown RBP15.82■□□□□ 0.12
USP48-213ENST00000529637 NDUFAB1O14561 156 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 ADAMTS3O15072 1205 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 HEATR3Q7Z4Q2 680 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 IRF2BP1Q8IU81 584 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 OR8K1Q8NGG5 319 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 SUFUQ9UMX1 484 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 LRP5O75197 1615 aa15.82■□□□□ 0.12
USP48-213ENST00000529637 ZEB2O60315 1214 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 IDEP14735 1019 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 ATP2C1P98194 919 aaPredicted RBP15.81■□□□□ 0.12
USP48-213ENST00000529637 FAM182BQ5T319 152 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 FBXO33Q7Z6M2 555 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 KIAA1328Q86T90 577 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 NELFBQ8WX92 580 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 AGPAT5Q9NUQ2 364 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 CEP83Q9Y592 693 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 KLK7P49862 253 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 GPIHBP1Q8IV16 184 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 STAG2Q8N3U4 1231 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 PNMA1Q8ND90 353 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 ATP8A2Q9NTI2 1148 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 SAP30BPQ9UHR5 308 aaKnown RBP15.81■□□□□ 0.12
USP48-213ENST00000529637 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 USP17L3A6NCW0 530 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 USP17L4A6NCW7 530 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 KRT14P02533 472 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 PTF1AQ7RTS3 328 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 USP17L1Q7RTZ2 530 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 AMOTL1Q8IY63 956 aa15.81■□□□□ 0.12
USP48-213ENST00000529637 ARPP21Q9UBL0 812 aaPredicted RBP15.81■□□□□ 0.12
USP48-213ENST00000529637 COL4A1P02462 1669 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 H0YHG0 523 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 PCP11498 1178 aaKnown RBP15.8■□□□□ 0.12
USP48-213ENST00000529637 CXCR5P32302 372 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 PMS1P54277 932 aaKnown RBP15.8■□□□□ 0.12
USP48-213ENST00000529637 DIXDC1Q155Q3 683 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 NPY5RQ15761 445 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 BLIDQ8IZY5 108 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 GPR101Q96P66 508 aaPredicted RBP15.8■□□□□ 0.12
USP48-213ENST00000529637 THRAP3Q9Y2W1 955 aaKnown RBP15.8■□□□□ 0.12
USP48-213ENST00000529637 LUC7L2Q9Y383 392 aaKnown RBP15.8■□□□□ 0.12
USP48-213ENST00000529637 TSPY3P0CV98 308 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 TSPY8P0CW00 308 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 PFKFB3Q16875 520 aaPredicted RBP15.8■□□□□ 0.12
USP48-213ENST00000529637 TPTE2Q6XPS3 522 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 CREG2Q8IUH2 290 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 SLC44A5Q8NCS7 719 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 ANKRD2Q9GZV1 360 aa15.8■□□□□ 0.12
USP48-213ENST00000529637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms