RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TNFAIP2Q03169 654 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 UBE3CQ15386 1083 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
VPS11-203ENST00000529545 PPP2R2DQ66LE6 453 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 CTR9Q6PD62 1173 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 ARMCX2Q7L311 632 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 MICALL1Q8N3F8 863 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 CHST13Q8NET6 341 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 MKNK2Q9HBH9 465 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 RAVER2Q9HCJ3 691 aaKnown RBP10.76□□□□□ -0.69
VPS11-203ENST00000529545 CXXC1Q9P0U4 656 aaPredicted RBP10.76□□□□□ -0.69
VPS11-203ENST00000529545 NYAP2Q9P242 653 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 ARPP21Q9UBL0 812 aaPredicted RBP10.76□□□□□ -0.69
VPS11-203ENST00000529545 SLC4A7Q9Y6M7 1214 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 C2orf72A6NCS6 295 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 SMIM22K7EJ46 135 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 NDUFB10O96000 172 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 CD4P01730 458 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 RLBP1P12271 317 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
VPS11-203ENST00000529545 OTOP2Q7RTS6 562 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 CCDC144CPQ8IYA2 1237 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 KIFC2Q96AC6 838 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 AP5M1Q9H0R1 490 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 BOLA2Q9H3K6 86 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 ZNF287Q9HBT7 754 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 FEM1BQ9UK73 627 aa10.75□□□□□ -0.69
VPS11-203ENST00000529545 GBF1Q92538 1859 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 MCM3APO60318 1980 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 CDH23Q9H251 3354 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 ASB14A6NK59 587 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 ZBBXA8MT70 800 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 CCER2I3L3R5 266 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 ADCY6O43306 1168 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 GTPBP6O43824 516 aaPredicted RBP10.74□□□□□ -0.69
VPS11-203ENST00000529545 RAB11FIP3O75154 756 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 FDX1P10109 184 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 ATP5JP18859 108 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 OAZ1P54368 228 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 BEX3Q00994 111 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 ITGA7Q13683 1181 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 FSCN1Q16658 493 aaKnown RBP10.74□□□□□ -0.69
VPS11-203ENST00000529545 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 CXCL17Q6UXB2 119 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 RPAP2Q8IXW5 612 aaPredicted RBP10.74□□□□□ -0.69
VPS11-203ENST00000529545 ZNF444Q8N0Y2 327 aaPredicted RBP10.74□□□□□ -0.69
VPS11-203ENST00000529545 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
VPS11-203ENST00000529545 SLC38A10Q9HBR0 1119 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 ISY1Q9ULR0 285 aaKnown RBP10.74□□□□□ -0.69
VPS11-203ENST00000529545 YBX2Q9Y2T7 364 aaKnown RBP10.74□□□□□ -0.69
VPS11-203ENST00000529545 PCDHA11Q9Y5I1 949 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 MYH7P12883 1935 aa10.74□□□□□ -0.69
VPS11-203ENST00000529545 NCOR1O75376 2440 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 MINDY4BA8MYZ0 360 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 MS4A1P11836 297 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 BMP1P13497 986 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 RASA1P20936 1047 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 RABGGTBP53611 331 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 CCL23P55773 120 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 NKX3-2P78367 333 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 SBK1Q52WX2 424 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 TLK2Q86UE8 772 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 STK11IPQ8N1F8 1099 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 SLC43A3Q8NBI5 491 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 HAUS7Q99871 368 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 ACAD9Q9H845 621 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 HOMER2Q9NSB8 354 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 COG6Q9Y2V7 657 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 BDP1A6H8Y1 2624 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 TCF20Q9UGU0 1960 aaKnown RBP10.73□□□□□ -0.69
VPS11-203ENST00000529545 ZBED9Q6R2W3 1325 aa10.73□□□□□ -0.69
VPS11-203ENST00000529545 MYH4Q9Y623 1939 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 CTAGE5O15320 804 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 DYNC1LI2O43237 492 aaPredicted RBP10.72□□□□□ -0.69
VPS11-203ENST00000529545 PFKMP08237 780 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 SUPT20HL2P0C7V6 817 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 ACTN1P12814 892 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 ATP2A2P16615 1042 aaKnown RBP10.72□□□□□ -0.69
VPS11-203ENST00000529545 TMEM67Q5HYA8 995 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 GIMAP6Q6P9H5 292 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 FGD4Q96M96 766 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 NECAB3Q96P71 396 aaPredicted RBP10.72□□□□□ -0.69
VPS11-203ENST00000529545 NOC4LQ9BVI4 516 aaKnown RBP10.72□□□□□ -0.69
VPS11-203ENST00000529545 PUS7LQ9H0K6 701 aaKnown RBP10.72□□□□□ -0.69
VPS11-203ENST00000529545 TRPV6Q9H1D0 765 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 SYNPO2Q9UMS6 1093 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 HCN4Q9Y3Q4 1203 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 UMODL1Q5DID0 1318 aa10.72□□□□□ -0.69
VPS11-203ENST00000529545 GREB1LQ9C091 1923 aaPredicted RBP10.72□□□□□ -0.69
VPS11-203ENST00000529545 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.71□□□□□ -0.69
VPS11-203ENST00000529545 ERC2O15083 957 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 TTLL1O95922 423 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 BMP3P12645 472 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 CNTN2Q02246 1040 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 TFF2Q03403 129 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 IKQ13123 557 aaPredicted RBP10.71□□□□□ -0.69
VPS11-203ENST00000529545 TKFCQ3LXA3 575 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 SLFN13Q68D06 897 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms