RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 PFKMP08237 780 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 SUPT20HL2P0C7V6 817 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
HIF3A-212ENST00000529205 MICALL1Q8N3F8 863 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 C1QTNF1Q9BXJ1 281 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 KATNBL1Q9H079 304 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 RNF146Q9NTX7 359 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 GNEQ9Y223 722 aaKnown RBP16.06■□□□□ 0.16
HIF3A-212ENST00000529205 PCDHA11Q9Y5I1 949 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 CDH23Q9H251 3354 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-212ENST00000529205 PRDM1O75626 825 aa16.05■□□□□ 0.16
HIF3A-212ENST00000529205 ALAS1P13196 640 aa16.05■□□□□ 0.16
HIF3A-212ENST00000529205 SLC1A4P43007 532 aa16.05■□□□□ 0.16
HIF3A-212ENST00000529205 SKIV2LQ15477 1246 aaKnown RBP16.05■□□□□ 0.16
HIF3A-212ENST00000529205 KBTBD3Q8NAB2 608 aa16.05■□□□□ 0.16
HIF3A-212ENST00000529205 STAG1Q8WVM7 1258 aa16.05■□□□□ 0.16
HIF3A-212ENST00000529205 FAM122AQ96E09 287 aa16.05■□□□□ 0.16
HIF3A-212ENST00000529205 A1CFQ9NQ94 594 aaKnown RBP16.05■□□□□ 0.16
HIF3A-212ENST00000529205 YBX2Q9Y2T7 364 aaKnown RBP16.05■□□□□ 0.16
HIF3A-212ENST00000529205 PATL2C9JE40 543 aaKnown RBP16.04■□□□□ 0.16
HIF3A-212ENST00000529205 RNF113AO15541 343 aaKnown RBP16.04■□□□□ 0.16
HIF3A-212ENST00000529205 GPAA1O43292 621 aa16.04■□□□□ 0.16
HIF3A-212ENST00000529205 B4GALT4O60513 344 aa16.04■□□□□ 0.16
HIF3A-212ENST00000529205 ACTN1P12814 892 aa16.04■□□□□ 0.16
HIF3A-212ENST00000529205 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
HIF3A-212ENST00000529205 NEDD1Q8NHV4 660 aa16.04■□□□□ 0.16
HIF3A-212ENST00000529205 AGBL1Q96MI9 1066 aa16.04■□□□□ 0.16
HIF3A-212ENST00000529205 NOC4LQ9BVI4 516 aaKnown RBP16.04■□□□□ 0.16
HIF3A-212ENST00000529205 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
HIF3A-212ENST00000529205 SPTBN5Q9NRC6 3674 aaKnown RBP16.04■□□□□ 0.16
HIF3A-212ENST00000529205 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
HIF3A-212ENST00000529205 ASTN1O14525 1302 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 UMODL1Q5DID0 1318 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 SOWAHBA6NEL2 793 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 SMPD1P17405 629 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 RABGGTBP53611 331 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 TFAP4Q01664 338 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 TMEM67Q5HYA8 995 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 EEPD1Q7L9B9 569 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 IFNL3Q8IZI9 196 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 OSBP2Q969R2 916 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 GMCL1Q96IK5 515 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 VTA1Q9NP79 307 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 GPHNQ9NQX3 736 aaPredicted RBP16.03■□□□□ 0.16
HIF3A-212ENST00000529205 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
HIF3A-212ENST00000529205 ADD3Q9UEY8 706 aaKnown RBP16.03■□□□□ 0.16
HIF3A-212ENST00000529205 PLA2G5P39877 138 aa16.02■□□□□ 0.16
HIF3A-212ENST00000529205 PSMC6P62333 389 aa16.02■□□□□ 0.16
HIF3A-212ENST00000529205 BRDTQ58F21 947 aaPredicted RBP16.02■□□□□ 0.16
HIF3A-212ENST00000529205 PRUNE2Q8WUY3 3088 aa16.02■□□□□ 0.15
HIF3A-212ENST00000529205 MYH7P12883 1935 aa16.02■□□□□ 0.15
HIF3A-212ENST00000529205 GRIN2DO15399 1336 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 KIF28PB7ZC32 967 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 SMARCA5O60264 1052 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-212ENST00000529205 PLA2G6O60733 806 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 MCCP23508 829 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 CPT1AP50416 773 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 RCSD1Q6JBY9 416 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 NSMFQ6X4W1 530 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 FBXO16Q8IX29 292 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-212ENST00000529205 SCLYQ96I15 445 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 MPHOSPH6Q99547 160 aaKnown RBP16.01■□□□□ 0.15
HIF3A-212ENST00000529205 NAPBQ9H115 298 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 WNT8AQ9H1J5 351 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 ALDH8A1Q9H2A2 487 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-212ENST00000529205 EPB41L4AQ9HCS5 686 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-212ENST00000529205 PDGFCQ9NRA1 345 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 CYP39A1Q9NYL5 469 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 RAPGEFL1Q9UHV5 662 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 STX8Q9UNK0 236 aa16.01■□□□□ 0.15
HIF3A-212ENST00000529205 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 ZNF536O15090 1300 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 TSPY2A6NKD2 308 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 ERC2O15083 957 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 BMP1P13497 986 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 RFC2P35250 354 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 TAPT1Q6NXT6 567 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 RETREG2Q8NC44 543 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 CCPG1Q9ULG6 757 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 COG5Q9UP83 839 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 MYH4Q9Y623 1939 aa16■□□□□ 0.15
HIF3A-212ENST00000529205 TNKSO95271 1327 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 RAD50Q92878 1312 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 MYOGP15173 224 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
HIF3A-212ENST00000529205 DUSP28Q4G0W2 176 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 KCTD1Q719H9 257 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 DEFB128Q7Z7B8 93 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 PHOSPHO2Q8TCD6 241 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 CHMP4CQ96CF2 233 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 SLC9A7Q96T83 725 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 PRR12Q9ULL5 1215 aa15.99■□□□□ 0.15
HIF3A-212ENST00000529205 M0R2C6 588 aa15.98■□□□□ 0.15
HIF3A-212ENST00000529205 CA3P07451 260 aa15.98■□□□□ 0.15
HIF3A-212ENST00000529205 MYL3P08590 195 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms