RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 PTPN18Q99952 460 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 ZMYND12Q9H0C1 365 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 TSHZ2Q9NRE2 1034 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 ZNF214Q9UL59 606 aaPredicted RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 CIZ1Q9ULV3 898 aaPredicted RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 NAP1L2Q9ULW6 460 aaPredicted RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 SMC3Q9UQE7 1217 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 V9GY48 417 aaPredicted RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 PARP14Q460N5 1801 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 RLFQ13129 1914 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 A0A0G2JMZ2 1700 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 PTPDC1A2A3K4 754 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 RAD21O60216 631 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 CD2BP2O95400 341 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 CTDNEP1O95476 244 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 GOLGA8HP0CJ92 632 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 PYGBP11216 843 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 BCRP11274 1271 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 MAPK4P31152 587 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 VEGFBP49765 207 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 PRMT2P55345 433 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 CCT2P78371 535 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 NUCB2P80303 420 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 AP3B2Q13367 1082 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 ORC2Q13416 577 aaPredicted RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 TRIM29Q14134 588 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 SAFBQ15424 915 aaKnown RBP eCLIP7.16□□□□□ -1.26
MACF1-228ENST00000528611 TAF1CQ15572 869 aaPredicted RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 ZYXQ15942 572 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 PKN1Q16512 942 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 CDC37Q16543 378 aaPredicted RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 TREML2Q5T2D2 321 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 C17orf99Q6UX52 265 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 CCDC84Q86UT8 332 aaPredicted RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 FAM43AQ8N2R8 423 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 MSL3Q8N5Y2 521 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 FBXO18Q8NFZ0 1043 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 KIFC2Q96AC6 838 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 IPO9Q96P70 1041 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 MPHOSPH6Q99547 160 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 P2RX7Q99572 595 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 NAP1L4Q99733 375 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 MYL10Q9BUA6 226 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 BEGAINQ9BUH8 593 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 SPATC1LQ9H0A9 340 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 BRMS1Q9HCU9 246 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 C6orf50Q9HD87 102 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 GPCPD1Q9NPB8 672 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 SLC5A4Q9NY91 659 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 ORC3Q9UBD5 711 aaPredicted RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 RBPJLQ9UBG7 517 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 DIS3Q9Y2L1 958 aaKnown RBP7.16□□□□□ -1.26
MACF1-228ENST00000528611 PCDHA1Q9Y5I3 950 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 PFASO15067 1338 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 ADGRA2Q96PE1 1338 aa7.16□□□□□ -1.26
MACF1-228ENST00000528611 FAM205CA6NFA0 338 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 IGF2BP3O00425 579 aaKnown RBP eCLIP7.15□□□□□ -1.26
MACF1-228ENST00000528611 STAM2O75886 525 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 PLEKHA8P1O95397 391 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 LARGE1O95461 756 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 FDPSP14324 419 aaKnown RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 CAPN2P17655 700 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 RXRAP19793 462 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 ERVK-9P63128 1117 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 ERVK-24P63145 666 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 STK3Q13188 491 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 QRICH1Q2TAL8 776 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 ATL3Q6DD88 541 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 TTBK2Q6IQ55 1244 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 XRRA1Q6P2D8 792 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 PAXIP1Q6ZW49 1069 aaPredicted RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 ZNF467Q7Z7K2 595 aaPredicted RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 CCDC83Q8IWF9 413 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 TRMT44Q8IYL2 757 aaKnown RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 DNAJC5GQ8N7S2 189 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 JMYQ8N9B5 988 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 DNERQ8NFT8 737 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 CUL5Q93034 780 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 PIGSQ96S52 555 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 NUP88Q99567 741 aaPredicted RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 SLC26A6Q9BXS9 759 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 UBA5Q9GZZ9 404 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 FOXP1Q9H334 677 aaPredicted RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 ZSCAN16Q9H4T2 348 aaPredicted RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 ACAD9Q9H845 621 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 EHMT1Q9H9B1 1298 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 NCOA5Q9HCD5 579 aaKnown RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 RIC8AQ9NPQ8 531 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 PCDHB8Q9UN66 801 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 ATP6V1DQ9Y5K8 247 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 ZNF536O15090 1300 aa7.15□□□□□ -1.26
MACF1-228ENST00000528611 FRMPD2Q68DX3 1309 aaPredicted RBP7.15□□□□□ -1.26
MACF1-228ENST00000528611 MAFGO15525 162 aa7.14□□□□□ -1.27
MACF1-228ENST00000528611 HOXD10P28358 340 aa7.14□□□□□ -1.27
MACF1-228ENST00000528611 GJB2P29033 226 aa7.14□□□□□ -1.27
MACF1-228ENST00000528611 SLC16A2P36021 539 aa7.14□□□□□ -1.27
MACF1-228ENST00000528611 TRAPPC10P48553 1259 aa7.14□□□□□ -1.27
MACF1-228ENST00000528611 HSD17B4P51659 736 aa7.14□□□□□ -1.27
MACF1-228ENST00000528611 ST3GAL1Q11201 340 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms