RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 KTN1Q86UP2 1357 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 K7ELQ4 463 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 KLHL41O60662 606 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 ZNF254O75437 659 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 FGRP09769 529 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 HOXD11P31277 338 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 RFC5P40937 340 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 TNNT3P45378 269 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 ST13P50502 369 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 PFKPQ01813 784 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 GABPB1Q06547 395 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 GRIK3Q13003 919 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 DACT2Q5SW24 774 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 GPATCH4Q5T3I0 446 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 ARHGEF18Q6ZSZ5 1173 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 GALNT5Q7Z7M9 940 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 LURAP1LQ8IV03 231 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 RPGRQ92834 1020 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 DDX17Q92841 729 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 SCLT1Q96NL6 688 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 CRACR2AQ9BSW2 395 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 ALG1Q9BT22 464 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 RYDENQ9NUL5 291 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 POLR3EQ9NVU0 708 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 ZC3H7BQ9UGR2 993 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 COL15A1P39059 1388 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 POLRMTO00411 1230 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 NBNO60934 754 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 USP2O75604 605 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 FDX1P10109 184 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 HALP42357 657 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 MATR3P43243 847 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 SLC4A3P48751 1232 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 HDAC4P56524 1084 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 HIBCHQ6NVY1 386 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 KSR2Q6VAB6 950 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 KIAA0825Q8IV33 1275 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 ZNF483Q8TF39 744 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 RTF1Q92541 710 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 MAML1Q92585 1016 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 CPSF2Q9P2I0 782 aaKnown RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 ZNF219Q9P2Y4 722 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 PFDN2Q9UHV9 154 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 TRAK1Q9UPV9 953 aa4.23□□□□□ -1.73
PTPN22-207ENST00000528414 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-207ENST00000528414 RLFQ13129 1914 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 A0A087WZG4 1122 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 LRRC72A6NJI9 287 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 F8W031 263 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 HSPA1AP0DMV8 641 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 HSPA1BP0DMV9 641 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 POLR2FP61218 127 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 FKBP1AP62942 108 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 ADCY1Q08828 1119 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 NFKBIBQ15653 356 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 DHTKD1Q96HY7 919 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 RSRC1Q96IZ7 334 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 C8orf76Q96K31 380 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 KCTD10Q9H3F6 313 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 KIAA1468Q9P260 1216 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 GTF2A1LQ9UNN4 478 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 JRKLQ9Y4A0 524 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 CARMIL3Q8ND23 1372 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 H7C1W4 665 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 RBAK-RBAKDNI3L0D1 243 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 KPNA6O60684 536 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 SKAP2O75563 359 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 PCP11498 1178 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 CENPAP49450 140 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 DDX10Q13206 875 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 TTLL12Q14166 644 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 SART3Q15020 963 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 TKFCQ3LXA3 575 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 VWA3BQ502W6 1294 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 IL31Q6EBC2 164 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 ZNF771Q7L3S4 317 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 TNS4Q8IZW8 715 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 STK11IPQ8N1F8 1099 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 NBPF15Q8N660 670 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 ANKRD42Q8N9B4 389 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 GOLGA5Q8TBA6 731 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 RBM14Q96PK6 669 aaKnown RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 UIMC1Q96RL1 719 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 SH3GL3Q99963 347 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 PHACTR1Q9C0D0 580 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 SLKQ9H2G2 1235 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-207ENST00000528414 RASSF4Q9H2L5 321 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 CNNM2Q9H8M5 875 aa4.22□□□□□ -1.73
PTPN22-207ENST00000528414 RAB3GAP2Q9H2M9 1393 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 PRPF40AO75400 957 aaKnown RBP4.21□□□□□ -1.73
PTPN22-207ENST00000528414 PPP1R37O75864 691 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 ECE1P42892 770 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 PEX5P50542 639 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 NEK3P51956 506 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 MPP3Q13368 585 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 CCDC80Q76M96 950 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 CPXCR1Q8N123 301 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 LRRC43Q8N309 656 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 CARNMT1Q8N4J0 409 aa4.21□□□□□ -1.73
PTPN22-207ENST00000528414 ABHD8Q96I13 439 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms