RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 TCEANC2Q96MN5 208 aa15.18■□□□□ 0.02
CNKSR1-211ENST00000528001 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
CNKSR1-211ENST00000528001 DHX16O60231 1041 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 CPA1P15085 419 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 TOB2Q14106 344 aaPredicted RBP15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 RTN1Q16799 776 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 SLC35G1Q2M3R5 365 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 MAMDC4Q6UXC1 1216 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 MICU3Q86XE3 530 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 NPLOC4Q8TAT6 608 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 ZNF274Q96GC6 653 aaPredicted RBP15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 MAML3Q96JK9 1138 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 CPVLQ9H3G5 476 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 A1CFQ9NQ94 594 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 MRPL11Q9Y3B7 192 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 SYNGAP1Q96PV0 1343 aa15.17■□□□□ 0.02
CNKSR1-211ENST00000528001 DOCK3Q8IZD9 2030 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 INHAP05111 366 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 ELNP15502 786 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 SNAP25P60880 206 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 MFSD14CQ5VZR4 134 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 MCF2L2Q86YR7 1114 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 SRBD1Q8N5C6 995 aaKnown RBP15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 FAM133AQ8N9E0 248 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 SH3TC2Q8TF17 1288 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 CLEC4DQ8WXI8 215 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 PDRG1Q9NUG6 133 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 CYP39A1Q9NYL5 469 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 RPTORQ8N122 1335 aa15.16■□□□□ 0.02
CNKSR1-211ENST00000528001 GOLGA8AA7E2F4 631 aa15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 GOLGA8BA8MQT2 603 aa15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 hCG_1984214I3L0E3 225 aa15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 METAP2P50579 478 aaKnown RBP eCLIP15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 APOBRQ0VD83 1088 aa15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 FUT2Q10981 343 aa15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 MUM1L1Q5H9M0 696 aa15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 ZNF713Q8N859 430 aaPredicted RBP15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 PIGSQ96S52 555 aa15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 UPF3BQ9BZI7 483 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 PAK6Q9NQU5 681 aaPredicted RBP15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 HOMER2Q9NSB8 354 aa15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 RBM27Q9P2N5 1060 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 SEC63Q9UGP8 760 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 RBBP6Q7Z6E9 1792 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-211ENST00000528001 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 PLEKHA8P1O95397 391 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 PDIA3P30101 505 aaKnown RBP15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 CCL14Q16627 93 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 DNERQ8NFT8 737 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 MORC4Q8TE76 937 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 TINF2Q9BSI4 451 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 C22orf23Q9BZE7 217 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 VAT1LQ9HCJ6 419 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 HMX1Q9NP08 348 aaPredicted RBP15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 BIN2Q9UBW5 565 aaPredicted RBP15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 ADD3Q9UEY8 706 aaKnown RBP15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 PCDHA1Q9Y5I3 950 aa15.14■□□□□ 0.01
CNKSR1-211ENST00000528001 ASB14A6NK59 587 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 NFIBO00712 420 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 MSCO60682 206 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 PPP1R11O60927 126 aaPredicted RBP15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 PGK2P07205 417 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 GJB1P08034 283 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 RXRAP19793 462 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 SLC4A3P48751 1232 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 CACNB2Q08289 660 aaPredicted RBP15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 RNF207Q6ZRF8 634 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 FLRT1Q9NZU1 646 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 CNTNAP5Q8WYK1 1306 aa15.13■□□□□ 0.01
CNKSR1-211ENST00000528001 B4DLN1 442 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 CYBAP13498 195 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 CCL5P13501 91 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 IFNAR1P17181 557 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 HSD17B4P51659 736 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 MRPL12P52815 198 aaKnown RBP15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 USH1GQ495M9 461 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 PPP1R18Q6NYC8 613 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 NSMFQ6X4W1 530 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 CCDC144CPQ8IYA2 1237 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 FGD4Q96M96 766 aa15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 MPHOSPH6Q99547 160 aaKnown RBP15.12■□□□□ 0.01
CNKSR1-211ENST00000528001 ZNFX1Q9P2E3 1918 aaKnown RBP15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 CCDC85CA6NKD9 419 aa15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 CDC27P30260 824 aa15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 GJA8P48165 433 aa15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 RPS6P62753 249 aaKnown RBP15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 BAATQ14032 418 aaPredicted RBP15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 MTFR1Q15390 333 aa15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 NTRK3Q16288 839 aa15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 FAM177A1Q8N128 213 aaPredicted RBP15.11■□□□□ 0.01
CNKSR1-211ENST00000528001 KIF2CQ99661 725 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms