RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DDX49Q9Y6V7 483 aaKnown RBP18.17■□□□□ 0.5
CAPN1-213ENST00000527897 ERICH2A1L162 156 aa18.16■□□□□ 0.5
CAPN1-213ENST00000527897 IFIT3O14879 490 aaKnown RBP18.16■□□□□ 0.5
CAPN1-213ENST00000527897 NEFLP07196 543 aa18.16■□□□□ 0.5
CAPN1-213ENST00000527897 PARP1P09874 1014 aaKnown RBP18.16■□□□□ 0.5
CAPN1-213ENST00000527897 BAATQ14032 418 aaPredicted RBP18.16■□□□□ 0.5
CAPN1-213ENST00000527897 ASPRV1Q53RT3 343 aa18.16■□□□□ 0.5
CAPN1-213ENST00000527897 RNF180Q86T96 592 aa18.16■□□□□ 0.5
CAPN1-213ENST00000527897 NCOA7Q8NI08 942 aa18.16■□□□□ 0.5
CAPN1-213ENST00000527897 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
CAPN1-213ENST00000527897 ESYT1Q9BSJ8 1104 aa18.16■□□□□ 0.5
CAPN1-213ENST00000527897 ABHD16BQ9H3Z7 469 aa18.16■□□□□ 0.5
CAPN1-213ENST00000527897 RBM27Q9P2N5 1060 aaKnown RBP18.16■□□□□ 0.5
CAPN1-213ENST00000527897 MYH6P13533 1939 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 ASB14A6NK59 587 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 CALML3P27482 149 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 CCDC144BQ3MJ40 725 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 STOX1Q6ZVD7 989 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 NOL8Q76FK4 1167 aaKnown RBP18.15■□□□□ 0.5
CAPN1-213ENST00000527897 EEPD1Q7L9B9 569 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 ADGRF4Q8IZF3 695 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 ANO2Q9NQ90 1003 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 ATP11BQ9Y2G3 1177 aa18.15■□□□□ 0.5
CAPN1-213ENST00000527897 RTP1P59025 263 aa18.14■□□□□ 0.49
CAPN1-213ENST00000527897 SART3Q15020 963 aaKnown RBP18.14■□□□□ 0.49
CAPN1-213ENST00000527897 SEC23AQ15436 765 aa18.14■□□□□ 0.49
CAPN1-213ENST00000527897 CDC37Q16543 378 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-213ENST00000527897 BMP2KLQ5H9B9 411 aa18.14■□□□□ 0.49
CAPN1-213ENST00000527897 SLC30A10Q6XR72 485 aa18.14■□□□□ 0.49
CAPN1-213ENST00000527897 LCTP09848 1927 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 RANBP2P49792 3224 aaKnown RBP18.13■□□□□ 0.49
CAPN1-213ENST00000527897 WTAPQ15007 396 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 SLC39A5Q6ZMH5 540 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 RNF207Q6ZRF8 634 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 STAG2Q8N3U4 1231 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 CLEC4DQ8WXI8 215 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 LSG1Q9H089 658 aaKnown RBP18.13■□□□□ 0.49
CAPN1-213ENST00000527897 PNMA2Q9UL42 364 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 TRIOBPQ9H2D6 2365 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 ASTN1O14525 1302 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 SYNRGQ9UMZ2 1314 aa18.13■□□□□ 0.49
CAPN1-213ENST00000527897 ADCY6O43306 1168 aa18.12■□□□□ 0.49
CAPN1-213ENST00000527897 DUSP11O75319 330 aaKnown RBP18.12■□□□□ 0.49
CAPN1-213ENST00000527897 C6orf222P0C671 652 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-213ENST00000527897 IRX5P78411 483 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-213ENST00000527897 CASC1Q6TDU7 716 aa18.12■□□□□ 0.49
CAPN1-213ENST00000527897 FBXO16Q8IX29 292 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-213ENST00000527897 SPC25Q9HBM1 224 aa18.12■□□□□ 0.49
CAPN1-213ENST00000527897 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
CAPN1-213ENST00000527897 WDR19Q8NEZ3 1342 aa18.12■□□□□ 0.49
CAPN1-213ENST00000527897 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-213ENST00000527897 MYADML2A6NDP7 307 aa18.11■□□□□ 0.49
CAPN1-213ENST00000527897 KLRF2D3W0D1 207 aa18.11■□□□□ 0.49
CAPN1-213ENST00000527897 ADAMTS4O75173 837 aa18.11■□□□□ 0.49
CAPN1-213ENST00000527897 MAGEA10P43363 369 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-213ENST00000527897 ALDH5A1P51649 535 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-213ENST00000527897 TNFAIP2Q03169 654 aa18.11■□□□□ 0.49
CAPN1-213ENST00000527897 QRICH1Q2TAL8 776 aa18.11■□□□□ 0.49
CAPN1-213ENST00000527897 TRIM60Q495X7 471 aa18.11■□□□□ 0.49
CAPN1-213ENST00000527897 JMJD4Q9H9V9 463 aa18.11■□□□□ 0.49
CAPN1-213ENST00000527897 PRDM5Q9NQX1 630 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-213ENST00000527897 ADD3Q9UEY8 706 aaKnown RBP18.11■□□□□ 0.49
CAPN1-213ENST00000527897 PRKAG2Q9UGJ0 569 aa18.11■□□□□ 0.49
CAPN1-213ENST00000527897 LRRC37A2A6NM11 1700 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 ABCB11O95342 1321 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 A0A1W2PQ45 241 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-213ENST00000527897 A0A1W2PQY0 241 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 SLC27A2O14975 620 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 RPS6P62753 249 aaKnown RBP18.1■□□□□ 0.49
CAPN1-213ENST00000527897 MDM2Q00987 491 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-213ENST00000527897 KCNA10Q16322 511 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 FBXO11Q86XK2 927 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 NUP133Q8WUM0 1156 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 VTI1AQ96AJ9 217 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 KATNBL1Q9H079 304 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 PDGFCQ9NRA1 345 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 MAD2L2Q9UI95 211 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 PHF24Q9UPV7 400 aa18.1■□□□□ 0.49
CAPN1-213ENST00000527897 PRC1O43663 620 aa18.09■□□□□ 0.49
CAPN1-213ENST00000527897 CDC45O75419 566 aa18.09■□□□□ 0.49
CAPN1-213ENST00000527897 ACLYP53396 1101 aa18.09■□□□□ 0.49
CAPN1-213ENST00000527897 ANTXR2P58335 489 aa18.09■□□□□ 0.49
CAPN1-213ENST00000527897 GNASQ5JWF2 1037 aa18.09■□□□□ 0.49
CAPN1-213ENST00000527897 CREB3L3Q68CJ9 461 aa18.09■□□□□ 0.49
CAPN1-213ENST00000527897 CATIPQ7Z7H3 387 aa18.09■□□□□ 0.49
CAPN1-213ENST00000527897 HOMER1Q86YM7 354 aa18.09■□□□□ 0.49
CAPN1-213ENST00000527897 MB21D2Q8IYB1 491 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-213ENST00000527897 PTGS1P23219 599 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 BEX3Q00994 111 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 PDE4DQ08499 809 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 GRM4Q14833 912 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 NFXL1Q6ZNB6 911 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 TLK2Q86UE8 772 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 TBC1D5Q92609 795 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 LBHD1Q9BQE6 289 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-213ENST00000527897 TSEN34Q9BSV6 310 aaKnown RBP18.08■□□□□ 0.48
CAPN1-213ENST00000527897 UBE2OQ9C0C9 1292 aaKnown RBP18.08■□□□□ 0.48
CAPN1-213ENST00000527897 VTA1Q9NP79 307 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 GPHNQ9NQX3 736 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms