RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 NFIBO00712 420 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 CTAGE5O15320 804 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 DUSP11O75319 330 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 BAATQ14032 418 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 IMMTQ16891 758 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 TMEM63BQ5T3F8 832 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 C1orf53Q5VUE5 145 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 NSMFQ6X4W1 530 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 CYB5R4Q7L1T6 521 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 RNF180Q86T96 592 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 SKAP1Q86WV1 359 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 ENAHQ8N8S7 591 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 LRCH3Q96II8 777 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 PDGFCQ9NRA1 345 aa12.26□□□□□ -0.45
PRPF40B-204ENST00000527253 A0A1W2PQ45 241 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 A0A1W2PQY0 241 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 TRIM43BA6NCK2 446 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 CYP21A2P08686 494 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 ACLYP53396 1101 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 TLE2Q04725 743 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 SEC23AQ15436 765 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 KCNA10Q16322 511 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 TAPT1Q6NXT6 567 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 MORC4Q8TE76 937 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 TSEN34Q9BSV6 310 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 UBE2OQ9C0C9 1292 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 UPF3AQ9H1J1 476 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 TNKSO95271 1327 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 RAD50Q92878 1312 aa12.25□□□□□ -0.45
PRPF40B-204ENST00000527253 SZT2Q5T011 3432 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 ASB14A6NK59 587 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 SGSM2O43147 1006 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 SMPD1P17405 629 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 ITGB8P26012 769 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 NT5C2P49902 561 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 GJA9P57773 515 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 SLC30A10Q6XR72 485 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 DNAH12Q6ZR08 3092 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 STOX1Q6ZVD7 989 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 IQCA1Q86XH1 822 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 KRT23Q9C075 422 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 PDLIM7Q9NR12 457 aa12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 GNEQ9Y223 722 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-204ENST00000527253 WDR19Q8NEZ3 1342 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 CST5P28325 142 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 NKX3-2P78367 333 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 BEX3Q00994 111 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 FBXO16Q8IX29 292 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 ADGRF4Q8IZF3 695 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 TDHQ8IZJ6 230 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 TBC1D5Q92609 795 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 CNNM2Q9H8M5 875 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 LAMA3Q16787 3333 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 LTBP2Q14767 1821 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 LRRC37A2A6NM11 1700 aa12.23□□□□□ -0.45
PRPF40B-204ENST00000527253 PTPDC1A2A3K4 754 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 MOXD2PA6NHM9 499 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 ASGR1P07306 291 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 C6orf222P0C671 652 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 CALML3P27482 149 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 ALDH5A1P51649 535 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 TNFAIP2Q03169 654 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 CDC37Q16543 378 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 SLC35G1Q2M3R5 365 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 LRIT3Q3SXY7 679 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 RNF207Q6ZRF8 634 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 STAG2Q8N3U4 1231 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 BADQ92934 168 aa12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-204ENST00000527253 DYNC1LI2O43237 492 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 PQBP1O60828 265 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 CDK7P50613 346 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 RPS6P62753 249 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 FAAP100Q0VG06 881 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 COL9A3Q14050 684 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 USH1GQ495M9 461 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 GNASQ5JWF2 1037 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 IQSEC1Q6DN90 963 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 LBHD1Q9BQE6 289 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 UBAC1Q9BSL1 405 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 JMJD4Q9H9V9 463 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 VAT1LQ9HCJ6 419 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 STARD7Q9NQZ5 370 aa12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-204ENST00000527253 E7EWF7 191 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 KIAA0355O15063 1070 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 CLTBP09497 229 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 EDNRBP24530 442 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 EPHB4P54760 987 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms