RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 C7orf25Q9BPX7 421 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 IRX2Q9BZI1 471 aaPredicted RBP12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 USP21Q9UK80 565 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 TRIM49BA6NDI0 452 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 PLCG1P19174 1290 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 LETM2Q2VYF4 491 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 TTI2Q6NXR4 508 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 FAM114A1Q8IWE2 563 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 ZNF507Q8TCN5 953 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 DNAJC7Q99615 494 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 RIOX1Q9H6W3 641 aa12.12□□□□□ -0.47
PTPMT1-204ENST00000527079 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 CHMP4BP1P59074 171 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 TSR1Q2NL82 804 aaKnown RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 MFSD14BQ5SR56 506 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 USP17L2Q6R6M4 530 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 SLC51AQ86UW1 340 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 CEP95Q96GE4 821 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 NUP58Q9BVL2 599 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 TRIM9Q9C026 710 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 EXOC1Q9NV70 894 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 CAPN11Q9UMQ6 739 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 LUC7L2Q9Y383 392 aaKnown RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 RNF225M0QZC1 329 aaPredicted RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 CCNE1P24864 410 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 HOXA7P31268 230 aaPredicted RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 PMS1P54277 932 aaKnown RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 KIF4BQ2VIQ3 1234 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 CC2D1AQ6P1N0 951 aaPredicted RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 RETREG2Q8NC44 543 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 CALML4Q96GE6 196 aa12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 NAPGQ99747 312 aaPredicted RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 EPN1Q9Y6I3 576 aaPredicted RBP12.11□□□□□ -0.47
PTPMT1-204ENST00000527079 TTC26A0AVF1 554 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 CCDC151A5D8V7 595 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 SRGNP10124 158 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 HOXA10P31260 410 aaPredicted RBP12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 ARHGAP25P42331 645 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 BRD3Q15059 726 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 CNNM4Q6P4Q7 775 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 SLC35F6Q8N357 371 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 CSGALNACT2Q8N6G5 542 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 P2RX5Q93086 422 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 ARFGAP3Q9NP61 516 aa12.1□□□□□ -0.47
PTPMT1-204ENST00000527079 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 A0A0U1RQJ8 604 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 NDUFA10O95299 355 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 SERPINB2P05120 415 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 PDE4DQ08499 809 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 WHAMMP3Q1A5X7 153 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 ASPRV1Q53RT3 343 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 FAM182BQ5T319 152 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 ZNF662Q6ZS27 426 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 TMC4Q7Z404 712 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 TBC1D16Q8TBP0 767 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 TBCKQ8TEA7 893 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 LRRC15Q8TF66 581 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 ATRIPQ8WXE1 791 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 PIGSQ96S52 555 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 PLIN2Q99541 437 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 DUSP9Q99956 384 aaKnown RBP12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 CPVLQ9H3G5 476 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 SUGT1Q9Y2Z0 365 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 PDHBP11177 359 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 GYS1P13807 737 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 ASIC1P78348 528 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 MEA1Q16626 185 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 IQCDQ96DY2 449 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 PKNOX2Q96KN3 472 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 CRAMP1Q96RY5 1269 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 HAUS4Q9H6D7 363 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 STK17AQ9UEE5 414 aa12.09□□□□□ -0.47
PTPMT1-204ENST00000527079 C10orf71Q711Q0 1435 aa12.08□□□□□ -0.47
PTPMT1-204ENST00000527079 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 USP17L5A8MUK1 530 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 TBC1D8O95759 1140 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 TECP42680 631 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 MTMR9Q96QG7 549 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 RAB34Q9BZG1 259 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 POLLQ9UGP5 575 aa12.08□□□□□ -0.48
PTPMT1-204ENST00000527079 SPATA31A6Q5VVP1 1343 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms