RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 JAK2O60674 1132 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 FMNL1O95466 1100 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-205ENST00000527046 ALAS1P13196 640 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 MAPK4P31152 587 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 GRB14Q14449 540 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 PFKFB3Q16875 520 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-205ENST00000527046 TKFCQ3LXA3 575 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 WWC2Q6AWC2 1192 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 PLEKHH3Q7Z736 793 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 NCAPG2Q86XI2 1143 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 FBXO11Q86XK2 927 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 CHST13Q8NET6 341 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 AIFM3Q96NN9 605 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 AMNQ9BXJ7 453 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 RNF26Q9BY78 433 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-205ENST00000527046 A1CFQ9NQ94 594 aaKnown RBP12.48□□□□□ -0.41
NEDD8-205ENST00000527046 PRDM10Q9NQV6 1147 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 RNF146Q9NTX7 359 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 COL20A1Q9P218 1284 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 CCPG1Q9ULG6 757 aa12.48□□□□□ -0.41
NEDD8-205ENST00000527046 STXBP3O00186 592 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 CCNA1P78396 465 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 CUL4AQ13619 759 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 NPY5RQ15761 445 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 USH1GQ495M9 461 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 CCDC83Q8IWF9 413 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 ABRAQ8N0Z2 381 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 RGS22Q8NE09 1264 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.41
NEDD8-205ENST00000527046 RRP36Q96EU6 259 aaKnown RBP12.47□□□□□ -0.41
NEDD8-205ENST00000527046 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 HOMER2Q9NSB8 354 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 GJB4Q9NTQ9 266 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 FLRT1Q9NZU1 646 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 SRRDQ9UH36 339 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
NEDD8-205ENST00000527046 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 SLC15A5A6NIM6 579 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 MEIS2O14770 477 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 STRNO43815 780 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
NEDD8-205ENST00000527046 ST18O60284 1047 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 PGK2P07205 417 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 HOXC6P09630 235 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 FLT3LGP49771 235 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 FCGRTP55899 365 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 PRKCZQ05513 592 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 BAATQ14032 418 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-205ENST00000527046 FAM133AQ8N9E0 248 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 ACAD9Q9H845 621 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 SH2B1Q9NRF2 756 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-205ENST00000527046 CYP39A1Q9NYL5 469 aa12.46□□□□□ -0.41
NEDD8-205ENST00000527046 ABCB11O95342 1321 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 SOWAHBA6NEL2 793 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 TNPO2O14787 897 aaKnown RBP12.45□□□□□ -0.42
NEDD8-205ENST00000527046 SCG2P13521 617 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 ADORA2AP29274 412 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 HSD17B4P51659 736 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 CNTN2Q02246 1040 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 MAP2K5Q13163 448 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 CCL14Q16627 93 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
NEDD8-205ENST00000527046 DDX49Q9Y6V7 483 aaKnown RBP12.45□□□□□ -0.42
NEDD8-205ENST00000527046 STK36Q9NRP7 1315 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 PTPDC1A2A3K4 754 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 M0R2N6 131 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 EDIL3O43854 480 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 GNRH1P01148 92 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 FCER1AP12319 257 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 COPB2P35606 906 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 MCM2P49736 904 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 RPS6P62753 249 aaKnown RBP12.44□□□□□ -0.42
NEDD8-205ENST00000527046 SSRP1Q08945 709 aaKnown RBP12.44□□□□□ -0.42
NEDD8-205ENST00000527046 IRF5Q13568 498 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 SLC30A10Q6XR72 485 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 SYTL5Q8TDW5 730 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-205ENST00000527046 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 TAAR1Q96RJ0 339 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 MMP19Q99542 508 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 LLPHQ9BRT6 129 aaKnown RBP12.44□□□□□ -0.42
NEDD8-205ENST00000527046 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-205ENST00000527046 FBXO40Q9UH90 709 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 PNMA2Q9UL42 364 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
NEDD8-205ENST00000527046 TRIM17Q9Y577 477 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 PLXNA1Q9UIW2 1896 aa12.44□□□□□ -0.42
NEDD8-205ENST00000527046 CPLX1O14810 134 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 DEXIO95424 95 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 XRCC5P13010 732 aaKnown RBP12.43□□□□□ -0.42
NEDD8-205ENST00000527046 CYP2B6P20813 491 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 CLK2P49760 499 aaKnown RBP12.43□□□□□ -0.42
NEDD8-205ENST00000527046 KIF22Q14807 665 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 USP17L6PQ6QN14 398 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms