RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 CLEC4DQ8WXI8 215 aa18.88■□□□□ 0.61
SSSCA1-202ENST00000526433 SHISA4Q96DD7 197 aa18.88■□□□□ 0.61
SSSCA1-202ENST00000526433 CRISPLD2Q9H0B8 497 aa18.88■□□□□ 0.61
SSSCA1-202ENST00000526433 RIOX1Q9H6W3 641 aa18.88■□□□□ 0.61
SSSCA1-202ENST00000526433 SLC12A7Q9Y666 1083 aa18.88■□□□□ 0.61
SSSCA1-202ENST00000526433 PFASO15067 1338 aa18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 CAPN2P17655 700 aa18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 BAATQ14032 418 aaPredicted RBP18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 USH1GQ495M9 461 aa18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 ZNF467Q7Z7K2 595 aaPredicted RBP18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 SGMS1Q86VZ5 419 aa18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 FBXO11Q86XK2 927 aa18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 FAM133AQ8N9E0 248 aa18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 CTCFLQ8NI51 663 aaPredicted RBP18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 MTMR8Q96EF0 704 aa18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 CYP39A1Q9NYL5 469 aa18.87■□□□□ 0.61
SSSCA1-202ENST00000526433 NFIBO00712 420 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 CALM1P0DP23 149 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 CALM2P0DP24 149 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 CALM3P0DP25 149 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 CYBAP13498 195 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 KIF5BP33176 963 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 BLOC1S2Q6QNY1 142 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 MAMDC4Q6UXC1 1216 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 SYNE3Q6ZMZ3 975 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 RAB11FIP4Q86YS3 637 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 MSL3Q8N5Y2 521 aaKnown RBP18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 FGD4Q96M96 766 aa18.86■□□□□ 0.61
SSSCA1-202ENST00000526433 BRCA2P51587 3418 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 ABCB11O95342 1321 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 SOWAHBA6NEL2 793 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 ZBTB5O15062 677 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 CYTH3O43739 400 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 SNAI1O95863 264 aaPredicted RBP18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 RXRAP19793 462 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 PSMA5P28066 241 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 GNAQP50148 359 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 LHX8Q68G74 356 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 CCDC144CPQ8IYA2 1237 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 FANCBQ8NB91 859 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 PIGSQ96S52 555 aa18.85■□□□□ 0.61
SSSCA1-202ENST00000526433 MCM3APO60318 1980 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 PTPDC1A2A3K4 754 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 SMARCA1P28370 1054 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 FGD1P98174 961 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 RNF207Q6ZRF8 634 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 Q6ZUG5 572 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 HOMER1Q86YM7 354 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 RGS22Q8NE09 1264 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 PURBQ96QR8 312 aaKnown RBP18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 LZTS2Q9BRK4 669 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 AMNQ9BXJ7 453 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 DDX20Q9UHI6 824 aaKnown RBP18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 NRBP1Q9UHY1 535 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 OGDHLQ9ULD0 1010 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 BRPF3Q9ULD4 1205 aa18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 MRPL11Q9Y3B7 192 aaKnown RBP18.84■□□□□ 0.61
SSSCA1-202ENST00000526433 SYNGAP1Q96PV0 1343 aa18.83■□□□□ 0.61
SSSCA1-202ENST00000526433 PPP1R11O60927 126 aaPredicted RBP18.83■□□□□ 0.6
SSSCA1-202ENST00000526433 CASTP20810 708 aaKnown RBP18.83■□□□□ 0.6
SSSCA1-202ENST00000526433 RPS6KB1P23443 525 aa18.83■□□□□ 0.6
SSSCA1-202ENST00000526433 APOA5Q6Q788 366 aa18.83■□□□□ 0.6
SSSCA1-202ENST00000526433 SRBD1Q8N5C6 995 aaKnown RBP18.83■□□□□ 0.6
SSSCA1-202ENST00000526433 PIBF1Q8WXW3 757 aa18.83■□□□□ 0.6
SSSCA1-202ENST00000526433 CNPY2Q9Y2B0 182 aa18.83■□□□□ 0.6
SSSCA1-202ENST00000526433 PNMA6FA0A0J9YX94 578 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 SEPT4O43236 478 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 MSCO60682 206 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 PLEKHA8P1O95397 391 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 ZNF865P0CJ78 1059 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 CALML3P27482 149 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 RPS6P62753 249 aaKnown RBP18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 ARMCX2Q7L311 632 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 MICU3Q86XE3 530 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 CMTR1Q8N1G2 835 aaKnown RBP18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 SPZ1Q9BXG8 430 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 PCDHA1Q9Y5I3 950 aa18.82■□□□□ 0.6
SSSCA1-202ENST00000526433 KLF18A0A0U1RQI7 1052 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 ASB14A6NK59 587 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 ZBTB43O43298 467 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 FARP2O94887 1054 aaPredicted RBP18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 SEC24BO95487 1268 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 TRAF1Q13077 416 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 SLC30A10Q6XR72 485 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 RUFY3Q7L099 469 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 UBE2Q1Q7Z7E8 422 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 MCF2L2Q86YR7 1114 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 ANKLE1Q8NAG6 615 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 TM6SF1Q9BZW5 370 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 MAF1Q9H063 256 aa18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 ADD3Q9UEY8 706 aaKnown RBP18.81■□□□□ 0.6
SSSCA1-202ENST00000526433 PDE4DIPQ5VU43 2346 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 ASTN1O14525 1302 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 APOBRQ0VD83 1088 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 ACVR2BQ13705 512 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms