RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TRIP12Q14669 1992 aaPredicted RBP13□□□□□ -0.33
NEDD8-204ENST00000526430 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 GPAA1O43292 621 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 FLOT1O75955 427 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 SHMT1P34896 483 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 COPB2P35606 906 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 TTC6Q86TZ1 520 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 RIOX2Q8IUF8 465 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 VTI1AQ96AJ9 217 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 VWCEQ96DN2 955 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 WNT8AQ9H1J5 351 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 DCP1AQ9NPI6 582 aaPredicted RBP12.99□□□□□ -0.33
NEDD8-204ENST00000526430 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 KMT2EQ8IZD2 1858 aa12.99□□□□□ -0.33
NEDD8-204ENST00000526430 TECTAO75443 2155 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 CACNA1HO95180 2353 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-204ENST00000526430 POTEB3A0JP26 581 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 ZBBXA8MT70 800 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 LPXNO60711 386 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 SNAI1O95863 264 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-204ENST00000526430 TAP1Q03518 808 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 GRB10Q13322 594 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 SEPT2Q15019 361 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 LEXMQ3ZCV2 418 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 GNASQ5JWF2 1037 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 POTEBQ6S5H4 581 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
NEDD8-204ENST00000526430 SDR42E1Q8WUS8 393 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 CERS4Q9HA82 394 aa12.98□□□□□ -0.33
NEDD8-204ENST00000526430 EPB41L4AQ9HCS5 686 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-204ENST00000526430 C5orf42Q9H799 3197 aa12.97□□□□□ -0.33
NEDD8-204ENST00000526430 ADCY6O43306 1168 aa12.97□□□□□ -0.33
NEDD8-204ENST00000526430 DCXO43602 365 aa12.97□□□□□ -0.33
NEDD8-204ENST00000526430 CABYRO75952 493 aa12.97□□□□□ -0.33
NEDD8-204ENST00000526430 CCL23P55773 120 aa12.97□□□□□ -0.33
NEDD8-204ENST00000526430 IRX5P78411 483 aaPredicted RBP12.97□□□□□ -0.33
NEDD8-204ENST00000526430 MCMDC2Q4G0Z9 681 aa12.97□□□□□ -0.33
NEDD8-204ENST00000526430 ZNF467Q7Z7K2 595 aaPredicted RBP12.97□□□□□ -0.33
NEDD8-204ENST00000526430 PHOSPHO2Q8TCD6 241 aa12.97□□□□□ -0.33
NEDD8-204ENST00000526430 ARNTL2Q8WYA1 636 aa12.97□□□□□ -0.33
NEDD8-204ENST00000526430 UBE2ZQ9H832 354 aaPredicted RBP12.97□□□□□ -0.33
NEDD8-204ENST00000526430 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
NEDD8-204ENST00000526430 BAZ2AQ9UIF9 1905 aaKnown RBP12.96□□□□□ -0.33
NEDD8-204ENST00000526430 PATL2C9JE40 543 aaKnown RBP12.96□□□□□ -0.33
NEDD8-204ENST00000526430 CTAGE5O15320 804 aa12.96□□□□□ -0.33
NEDD8-204ENST00000526430 SSTR3P32745 418 aaPredicted RBP12.96□□□□□ -0.33
NEDD8-204ENST00000526430 PLCD1P51178 756 aa12.96□□□□□ -0.33
NEDD8-204ENST00000526430 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.33
NEDD8-204ENST00000526430 AGBL1Q96MI9 1066 aa12.96□□□□□ -0.33
NEDD8-204ENST00000526430 ABHD16BQ9H3Z7 469 aa12.96□□□□□ -0.33
NEDD8-204ENST00000526430 ZNF214Q9UL59 606 aaPredicted RBP12.96□□□□□ -0.33
NEDD8-204ENST00000526430 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.33
NEDD8-204ENST00000526430 SCN10AQ9Y5Y9 1956 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 DNAJC25-GNG10A0A024R161 153 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 WDR46O15213 610 aaKnown RBP12.95□□□□□ -0.34
NEDD8-204ENST00000526430 SGSM2O43147 1006 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 CYP2D6P10635 497 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
NEDD8-204ENST00000526430 GABPAQ06546 454 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 ACVR2BQ13705 512 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 CTR9Q6PD62 1173 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 IFNL3Q8IZI9 196 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.95□□□□□ -0.34
NEDD8-204ENST00000526430 ATP8A2Q9NTI2 1148 aa12.95□□□□□ -0.34
NEDD8-204ENST00000526430 PTPRZ1P23471 2315 aaPredicted RBP12.95□□□□□ -0.34
NEDD8-204ENST00000526430 ZFHX2Q9C0A1 2572 aaPredicted RBP12.94□□□□□ -0.34
NEDD8-204ENST00000526430 CYP2D7A0A087X1C5 515 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 B4GALT4O60513 344 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 ARHGEF15O94989 841 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 ACTN1P12814 892 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 STAT3P40763 770 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 USP5P45974 858 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 PTH1RQ03431 593 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 ALX1Q15699 326 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
NEDD8-204ENST00000526430 PUS10Q3MIT2 529 aaKnown RBP12.94□□□□□ -0.34
NEDD8-204ENST00000526430 CCDC144BQ3MJ40 725 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 C12orf60Q5U649 245 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
NEDD8-204ENST00000526430 MFSD14AQ96MC6 490 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 PHOX2BQ99453 314 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
NEDD8-204ENST00000526430 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 VCPKMTQ9H867 229 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 TMX2Q9Y320 296 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 ATG2AQ2TAZ0 1938 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 GREB1LQ9C091 1923 aaPredicted RBP12.94□□□□□ -0.34
NEDD8-204ENST00000526430 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
NEDD8-204ENST00000526430 PLXNA3P51805 1871 aa12.93□□□□□ -0.34
NEDD8-204ENST00000526430 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
NEDD8-204ENST00000526430 ZNF536O15090 1300 aa12.93□□□□□ -0.34
NEDD8-204ENST00000526430 GRIN2DO15399 1336 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms