RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CLCQ05315 142 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 GK5Q6ZS86 529 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 ERICH6Q7L0X2 663 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 CARFQ8N187 725 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 SLC16A11Q8NCK7 471 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 RBM15Q96T37 977 aaKnown RBP eCLIP5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 DSCC1Q9BVC3 393 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 LNPKQ9C0E8 428 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 BCAS3Q9H6U6 928 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 EHMT1Q9H9B1 1298 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 PDLIM7Q9NR12 457 aa5.25□□□□□ -1.57
ECHDC1-219ENST00000526299 SORBS3O60504 671 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 ASGR2P07307 311 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 NCAM1P13591 858 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 NME1P15531 152 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 GJA9P57773 515 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 RNF38Q9H0F5 515 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 KCNQ5Q9NR82 932 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 PRR13Q9NZ81 148 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 VTI1BQ9UEU0 232 aa5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 DBR1Q9UK59 544 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 SUPT16HQ9Y5B9 1047 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-219ENST00000526299 FAM86C2PA6NEL3 165 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 H0Y8X5 98 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 SHOXO15266 292 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 EIF4A3P38919 411 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 SEZ6Q53EL9 994 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 ERMP1Q7Z2K6 904 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 B3GNT8Q7Z7M8 397 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 ALG3Q92685 438 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 C8orf49Q96NF6 230 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 NOX5Q96PH1 765 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 SLC9A7Q96T83 725 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 RXFP1Q9HBX9 757 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 SRRDQ9UH36 339 aa5.23□□□□□ -1.57
ECHDC1-219ENST00000526299 C9IYK1 514 aa5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 PATL2C9JE40 543 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 TNFRSF10CO14798 259 aa5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 FGF10O15520 208 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 CPZQ66K79 652 aa5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 CWF19L1Q69YN2 538 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 C7orf61Q8IZ16 206 aa5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 ZNF296Q8WUU4 475 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 LOXL4Q96JB6 756 aa5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 MRS2Q9HD23 443 aa5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 SPATA6Q9NWH7 488 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 UBP1Q9NZI7 540 aa5.22□□□□□ -1.57
ECHDC1-219ENST00000526299 ZNF20P17024 532 aa5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 PMLP29590 882 aa5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 MCM4P33991 863 aa5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 SARSP49591 514 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 TAGLNQ01995 201 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 TDRD10Q5VZ19 366 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 CYP2R1Q6VVX0 501 aa5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 ZNF761Q86XN6 746 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 CCDC144CPQ8IYA2 1237 aa5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 BRF1Q92994 677 aa5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 SRRTQ9BXP5 876 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 SCAND2PQ9GZW5 306 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-219ENST00000526299 MEIS3P2A8K0S8 358 aa5.2□□□□□ -1.58
ECHDC1-219ENST00000526299 C1QTNF3-AMACRE9PGA6 284 aa5.2□□□□□ -1.58
ECHDC1-219ENST00000526299 FBXO33Q7Z6M2 555 aa5.2□□□□□ -1.58
ECHDC1-219ENST00000526299 USP48Q86UV5 1035 aa5.2□□□□□ -1.58
ECHDC1-219ENST00000526299 SMARCC2Q8TAQ2 1214 aa5.2□□□□□ -1.58
ECHDC1-219ENST00000526299 FCRL3Q96P31 734 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-219ENST00000526299 TRAIPQ9BWF2 469 aa5.2□□□□□ -1.58
ECHDC1-219ENST00000526299 SUCOQ9UBS9 1254 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-219ENST00000526299 OVOL3O00110 214 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 GLI4P10075 376 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 IFNGR1P15260 489 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 CORO7P57737 925 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 ZNF445P59923 1031 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 LRRFIP1Q32MZ4 808 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 TBC1D10BQ4KMP7 808 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 DCAF15Q66K64 600 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 REXO1Q8N1G1 1221 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 PTCHD1Q96NR3 888 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 SAMD11Q96NU1 681 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 SORCS2Q96PQ0 1159 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 C1QTNF3Q9BXJ4 246 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 NTMQ9P121 344 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 ADAMTS1Q9UHI8 967 aa5.19□□□□□ -1.58
ECHDC1-219ENST00000526299 ACRP10323 421 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 L1CAMP32004 1257 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 APOBRQ0VD83 1088 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 NOL9Q5SY16 702 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 SND1Q7KZF4 910 aaKnown RBP eCLIP5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 PPFIBP1Q86W92 1011 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 NLGN2Q8NFZ4 835 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 ADAMTS17Q8TE56 1095 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 ZBTB8AQ96BR9 441 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 TSPAN17Q96FV3 270 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 FBLN5Q9UBX5 448 aa5.18□□□□□ -1.58
ECHDC1-219ENST00000526299 PLATP00750 562 aa5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 CD3EP07766 207 aa5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 NOP2P46087 812 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 ZNF165P49910 485 aa5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 HMGA2P52926 109 aa5.17□□□□□ -1.58
ECHDC1-219ENST00000526299 SMAD4Q13485 552 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms