RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 RAET1EQ8TD07 263 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 PIGSQ96S52 555 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 MMP19Q99542 508 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 ACAD9Q9H845 621 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 RNF146Q9NTX7 359 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 HTTP42858 3142 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 ZNFX1Q9P2E3 1918 aaKnown RBP15□□□□□ -0.01
SMPD1-202ENST00000526280 PNMA6FA0A0J9YX94 578 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 PPP1R11O60927 126 aaPredicted RBP14.99□□□□□ -0.01
SMPD1-202ENST00000526280 COBLO75128 1261 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 HOXC6P09630 235 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 CYP2B6P20813 491 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 MUM1L1Q5H9M0 696 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 HOMER1Q86YM7 354 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 CCDC82Q8N4S0 544 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 RRP36Q96EU6 259 aaKnown RBP14.99□□□□□ -0.01
SMPD1-202ENST00000526280 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 MYH6P13533 1939 aa14.99□□□□□ -0.01
SMPD1-202ENST00000526280 CCDC85CA6NKD9 419 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 ADCY3O60266 1144 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 RABEP1Q15276 862 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 USH1GQ495M9 461 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 DPP9Q86TI2 863 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 ANKRD35Q8N283 1001 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 PXYLP1Q8TE99 480 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 CLEC4DQ8WXI8 215 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 PIBF1Q8WXW3 757 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 APBA2Q99767 749 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 TPCN1Q9ULQ1 816 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 ZNF236Q9UL36 1845 aa14.98□□□□□ -0.01
SMPD1-202ENST00000526280 DNAJC25-GNG10A0A024R161 153 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 GRK4P32298 578 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 CCT2P78371 535 aaKnown RBP14.97□□□□□ -0.01
SMPD1-202ENST00000526280 TRAF1Q13077 416 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 SLAIN1Q8ND83 568 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 NPLOC4Q8TAT6 608 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 NCOA5Q9HCD5 579 aaKnown RBP14.97□□□□□ -0.01
SMPD1-202ENST00000526280 A1CFQ9NQ94 594 aaKnown RBP14.97□□□□□ -0.01
SMPD1-202ENST00000526280 SLC5A4Q9NY91 659 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 MRPL11Q9Y3B7 192 aaKnown RBP14.97□□□□□ -0.01
SMPD1-202ENST00000526280 PCDHA1Q9Y5I3 950 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 ABCB11O95342 1321 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 CNTNAP5Q8WYK1 1306 aa14.97□□□□□ -0.01
SMPD1-202ENST00000526280 PFASO15067 1338 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 NFIBO00712 420 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 PGK2P07205 417 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 ELNP15502 786 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 NTRK3Q16288 839 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 ZNF792Q3KQV3 632 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 SLC9C1Q4G0N8 1177 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 TRMT44Q8IYL2 757 aaKnown RBP14.96□□□□□ -0.01
SMPD1-202ENST00000526280 RGS22Q8NE09 1264 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 IL27Q8NEV9 243 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 MAF1Q9H063 256 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 CYP39A1Q9NYL5 469 aa14.96□□□□□ -0.01
SMPD1-202ENST00000526280 SEC63Q9UGP8 760 aaKnown RBP14.96□□□□□ -0.01
SMPD1-202ENST00000526280 DIS3Q9Y2L1 958 aaKnown RBP14.96□□□□□ -0.01
SMPD1-202ENST00000526280 V9GY48 417 aaPredicted RBP14.96□□□□□ -0.01
SMPD1-202ENST00000526280 hCG_1642624A0A1W2PR95 340 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 PFKFB2O60825 505 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 IGHA2P01877 340 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 IFNAR1P17181 557 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 STK3Q13188 491 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 CCL14Q16627 93 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 NSMFQ6X4W1 530 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 SH3TC2Q8TF17 1288 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 TRIB2Q92519 343 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 ARMC5Q96C12 935 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 SLKQ9H2G2 1235 aaPredicted RBP14.95□□□□□ -0.02
SMPD1-202ENST00000526280 CENPFP49454 3210 aa14.95□□□□□ -0.02
SMPD1-202ENST00000526280 POTEB2H3BUK9 544 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 OPLAHO14841 1288 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 CNTN2Q02246 1040 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 SCRN1Q12765 414 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 BAATQ14032 418 aaPredicted RBP14.94□□□□□ -0.02
SMPD1-202ENST00000526280 ME3Q16798 604 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 OLFML2BQ68BL8 750 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 RNF207Q6ZRF8 634 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 NOL8Q76FK4 1167 aaKnown RBP14.94□□□□□ -0.02
SMPD1-202ENST00000526280 MCF2L2Q86YR7 1114 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 FAM133AQ8N9E0 248 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 TBC1D5Q92609 795 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 MAML3Q96JK9 1138 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 FLRT1Q9NZU1 646 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 LIMCH1Q9UPQ0 1083 aa14.94□□□□□ -0.02
SMPD1-202ENST00000526280 PTPDC1A2A3K4 754 aa14.93□□□□□ -0.02
SMPD1-202ENST00000526280 PRPF3O43395 683 aaKnown RBP14.93□□□□□ -0.02
SMPD1-202ENST00000526280 HMGCRP04035 888 aa14.93□□□□□ -0.02
SMPD1-202ENST00000526280 RPS6P62753 249 aaKnown RBP14.93□□□□□ -0.02
SMPD1-202ENST00000526280 ZNF467Q7Z7K2 595 aaPredicted RBP14.93□□□□□ -0.02
SMPD1-202ENST00000526280 PHKBQ93100 1093 aa14.93□□□□□ -0.02
SMPD1-202ENST00000526280 FGD4Q96M96 766 aa14.93□□□□□ -0.02
SMPD1-202ENST00000526280 PLXNA1Q9UIW2 1896 aa14.93□□□□□ -0.02
SMPD1-202ENST00000526280 CPLX1O14810 134 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 ST18O60284 1047 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 LARGE1O95461 756 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 INHAP05111 366 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 GHRHRQ02643 423 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 CPLX2Q6PUV4 134 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms