RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 SZRD1Q7Z422 152 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 TRIM42Q8IWZ5 723 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 SYNJ2O15056 1496 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 PDHA1P08559 390 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 SLFN14P0C7P3 912 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 ESRRAP11474 423 aaPredicted RBP14.89□□□□□ -0.03
LRRK1-202ENST00000525284 TTLL11Q8NHH1 800 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 MAML1Q92585 1016 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 SNX5Q9Y5X3 404 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 EIF4E1BA6NMX2 242 aaKnown RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 GRM8O00222 908 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 TRPC1P48995 793 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 PDE6CP51160 858 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 YWHAHQ04917 246 aaPredicted RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 SPOPLQ6IQ16 392 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 SH2D4AQ9H788 454 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 ZNF215Q9UL58 517 aaPredicted RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 TROQ12816 1431 aaPredicted RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 OCRLQ01968 901 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 COPS6Q7L5N1 327 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 ATG3Q9NT62 314 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 NSFL1CQ9UNZ2 370 aaKnown RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 NIP7Q9Y221 180 aaKnown RBP eCLIP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 PPP2R2CQ9Y2T4 447 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 GJA3Q9Y6H8 435 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 TRIM67Q6ZTA4 783 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 A6NJR5 290 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 XRCC5P13010 732 aaKnown RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 TFCP2Q12800 502 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 CYP4F22Q6NT55 531 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 TPH2Q8IWU9 490 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 DIS3L2Q8IYB7 885 aaKnown RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 TRIM15Q9C019 465 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 BICC1Q9H694 974 aaKnown RBP14.88□□□□□ -0.03
LRRK1-202ENST00000525284 ACTN1P12814 892 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 BEGAINQ9BUH8 593 aa14.88□□□□□ -0.03
LRRK1-202ENST00000525284 CTNND1O60716 968 aaKnown RBP14.87□□□□□ -0.03
LRRK1-202ENST00000525284 SPAG7O75391 227 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 ATP8B2P98198 1209 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 NBPF20Q3BBV1 942 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 SESTD1Q86VW0 696 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 A0A087WUV0 522 aaPredicted RBP14.87□□□□□ -0.03
LRRK1-202ENST00000525284 KCNJ18B7U540 433 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 ZMYND10O75800 440 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 KRT8P05787 483 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 SLCO1A2P46721 670 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 KCNJ12Q14500 433 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 OR8K1Q8NGG5 319 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 SUGT1Q9Y2Z0 365 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 CPP00450 1065 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 FAM102BQ5T8I3 360 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 METTL13Q8N6R0 699 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 APBA1Q02410 837 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 TAGAPQ8N103 731 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 USP26Q9BXU7 913 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 TRPV6Q9H1D0 765 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 PICK1Q9NRD5 415 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 STK24Q9Y6E0 443 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 H0Y3Z8 333 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 RPS6KB1P23443 525 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 KIF19Q2TAC6 998 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 TTC6Q86TZ1 520 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 NAF1Q96HR8 494 aaKnown RBP14.87□□□□□ -0.03
LRRK1-202ENST00000525284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.87□□□□□ -0.03
LRRK1-202ENST00000525284 BIVM-ERCC5R4GMW8 1640 aa14.87□□□□□ -0.03
LRRK1-202ENST00000525284 ADCY7P51828 1080 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 CAPRIN1Q14444 709 aaKnown RBP14.86□□□□□ -0.03
LRRK1-202ENST00000525284 KRT27Q7Z3Y8 459 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 TBC1D1Q86TI0 1168 aaPredicted RBP14.86□□□□□ -0.03
LRRK1-202ENST00000525284 LZICQ8WZA0 190 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 ZNF653Q96CK0 615 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 TLK1Q9UKI8 766 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 TTI1O43156 1089 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 GADD45BO75293 160 aaPredicted RBP14.86□□□□□ -0.03
LRRK1-202ENST00000525284 TJAP1Q5JTD0 557 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 ARHGEF18Q6ZSZ5 1173 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 PARP3Q9Y6F1 533 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 IVNS1ABPQ9Y6Y0 642 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 GNA14O95837 355 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 EHHADHQ08426 723 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 KCNA1Q09470 495 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 SH3GL2Q99962 352 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 CHCHD3Q9NX63 227 aaKnown RBP14.86□□□□□ -0.03
LRRK1-202ENST00000525284 ATP8A1Q9Y2Q0 1164 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 POTEB3A0JP26 581 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 DTNBO60941 627 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 PDE6BP35913 854 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 POLR2FP61218 127 aaKnown RBP14.86□□□□□ -0.03
LRRK1-202ENST00000525284 PRKG1Q13976 671 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 SF3B3Q15393 1217 aaKnown RBP14.86□□□□□ -0.03
LRRK1-202ENST00000525284 POTEBQ6S5H4 581 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 CPXCR1Q8N123 301 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 DEPTORQ8TB45 409 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 TUBB6Q9BUF5 446 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 SPZ1Q9BXG8 430 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 PCDHB15Q9Y5E8 787 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 SORBS3O60504 671 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 CATSPER3Q86XQ3 398 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms