RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PNMA2Q9UL42 364 aa21.73■■□□□ 1.07
CAPN1-203ENST00000525013 SYNRGQ9UMZ2 1314 aa21.73■■□□□ 1.07
CAPN1-203ENST00000525013 A0A1W2PPC1 479 aa21.72■■□□□ 1.07
CAPN1-203ENST00000525013 PTPDC1A2A3K4 754 aa21.72■■□□□ 1.07
CAPN1-203ENST00000525013 NFIBO00712 420 aa21.72■■□□□ 1.07
CAPN1-203ENST00000525013 SGSM2O43147 1006 aa21.72■■□□□ 1.07
CAPN1-203ENST00000525013 ADAMTS4O75173 837 aa21.72■■□□□ 1.07
CAPN1-203ENST00000525013 BMP8BP34820 402 aa21.72■■□□□ 1.07
CAPN1-203ENST00000525013 MDM2Q00987 491 aaPredicted RBP21.72■■□□□ 1.07
CAPN1-203ENST00000525013 BAATQ14032 418 aaPredicted RBP21.72■■□□□ 1.07
CAPN1-203ENST00000525013 NOL8Q76FK4 1167 aaKnown RBP21.72■■□□□ 1.07
CAPN1-203ENST00000525013 PURBQ96QR8 312 aaKnown RBP21.72■■□□□ 1.07
CAPN1-203ENST00000525013 DDX49Q9Y6V7 483 aaKnown RBP21.72■■□□□ 1.07
CAPN1-203ENST00000525013 LCTP09848 1927 aa21.72■■□□□ 1.07
CAPN1-203ENST00000525013 C6orf222P0C671 652 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-203ENST00000525013 TRIM60Q495X7 471 aa21.71■■□□□ 1.07
CAPN1-203ENST00000525013 IFIT1BQ5T764 474 aaKnown RBP21.71■■□□□ 1.07
CAPN1-203ENST00000525013 LBHD1Q9BQE6 289 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-203ENST00000525013 UBE2OQ9C0C9 1292 aaKnown RBP21.71■■□□□ 1.07
CAPN1-203ENST00000525013 SPC25Q9HBM1 224 aa21.71■■□□□ 1.07
CAPN1-203ENST00000525013 A0A1W2PQ45 241 aaPredicted RBP21.7■■□□□ 1.06
CAPN1-203ENST00000525013 A0A1W2PQY0 241 aa21.7■■□□□ 1.06
CAPN1-203ENST00000525013 ADCY6O43306 1168 aa21.7■■□□□ 1.06
CAPN1-203ENST00000525013 DHX16O60231 1041 aaKnown RBP21.7■■□□□ 1.06
CAPN1-203ENST00000525013 CYP21A2P08686 494 aa21.7■■□□□ 1.06
CAPN1-203ENST00000525013 PARP1P09874 1014 aaKnown RBP21.7■■□□□ 1.06
CAPN1-203ENST00000525013 USH1GQ495M9 461 aa21.7■■□□□ 1.06
CAPN1-203ENST00000525013 ASPRV1Q53RT3 343 aa21.7■■□□□ 1.06
CAPN1-203ENST00000525013 CYB5R4Q7L1T6 521 aa21.7■■□□□ 1.06
CAPN1-203ENST00000525013 TSEN34Q9BSV6 310 aaKnown RBP21.7■■□□□ 1.06
CAPN1-203ENST00000525013 KATNBL1Q9H079 304 aa21.7■■□□□ 1.06
CAPN1-203ENST00000525013 PRDM5Q9NQX1 630 aaPredicted RBP21.7■■□□□ 1.06
CAPN1-203ENST00000525013 ASTN1O14525 1302 aa21.7■■□□□ 1.06
CAPN1-203ENST00000525013 CALML3P27482 149 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 ACLYP53396 1101 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 TNFAIP2Q03169 654 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 SNX17Q15036 470 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 KCNA10Q16322 511 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 RNF207Q6ZRF8 634 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 EEPD1Q7L9B9 569 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 RALYLQ86SE5 291 aaKnown RBP21.69■■□□□ 1.06
CAPN1-203ENST00000525013 KLHDC9Q8NEP7 349 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 CLEC4DQ8WXI8 215 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 ADD3Q9UEY8 706 aaKnown RBP21.69■■□□□ 1.06
CAPN1-203ENST00000525013 WDR19Q8NEZ3 1342 aa21.69■■□□□ 1.06
CAPN1-203ENST00000525013 MYADML2A6NDP7 307 aa21.68■■□□□ 1.06
CAPN1-203ENST00000525013 IRX5P78411 483 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-203ENST00000525013 TLE2Q04725 743 aa21.68■■□□□ 1.06
CAPN1-203ENST00000525013 CDC37Q16543 378 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-203ENST00000525013 GNASQ5JWF2 1037 aa21.68■■□□□ 1.06
CAPN1-203ENST00000525013 KIAA1211Q6ZU35 1233 aa21.68■■□□□ 1.06
CAPN1-203ENST00000525013 CENPQQ7L2Z9 268 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-203ENST00000525013 ADGRF4Q8IZF3 695 aa21.68■■□□□ 1.06
CAPN1-203ENST00000525013 NUP133Q8WUM0 1156 aa21.68■■□□□ 1.06
CAPN1-203ENST00000525013 VAT1LQ9HCJ6 419 aa21.68■■□□□ 1.06
CAPN1-203ENST00000525013 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.67■■□□□ 1.06
CAPN1-203ENST00000525013 SEC23AQ15436 765 aa21.67■■□□□ 1.06
CAPN1-203ENST00000525013 C1orf53Q5VUE5 145 aa21.67■■□□□ 1.06
CAPN1-203ENST00000525013 SLC30A10Q6XR72 485 aa21.67■■□□□ 1.06
CAPN1-203ENST00000525013 FBXO16Q8IX29 292 aaPredicted RBP21.67■■□□□ 1.06
CAPN1-203ENST00000525013 PCSK9Q8NBP7 692 aaKnown RBP21.67■■□□□ 1.06
CAPN1-203ENST00000525013 VTI1AQ96AJ9 217 aa21.67■■□□□ 1.06
CAPN1-203ENST00000525013 UPF3AQ9H1J1 476 aaKnown RBP21.67■■□□□ 1.06
CAPN1-203ENST00000525013 STARD7Q9NQZ5 370 aa21.67■■□□□ 1.06
CAPN1-203ENST00000525013 TAF6LQ9Y6J9 622 aa21.67■■□□□ 1.06
CAPN1-203ENST00000525013 BAZ2BQ9UIF8 2168 aaKnown RBP21.67■■□□□ 1.06
CAPN1-203ENST00000525013 LRRC37A2A6NM11 1700 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 ERICH2A1L162 156 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 MOXD2PA6NHM9 499 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 E7EWF7 191 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 IFIT3O14879 490 aaKnown RBP21.66■■□□□ 1.06
CAPN1-203ENST00000525013 PQBP1O60828 265 aaKnown RBP21.66■■□□□ 1.06
CAPN1-203ENST00000525013 ALDH5A1P51649 535 aaPredicted RBP21.66■■□□□ 1.06
CAPN1-203ENST00000525013 GJA9P57773 515 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 RPS6P62753 249 aaKnown RBP21.66■■□□□ 1.06
CAPN1-203ENST00000525013 TDHQ8IZJ6 230 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 NCOA7Q8NI08 942 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 MAP4K1Q92918 833 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 PDGFCQ9NRA1 345 aa21.66■■□□□ 1.06
CAPN1-203ENST00000525013 RBM8AQ9Y5S9 174 aaKnown RBP21.66■■□□□ 1.06
CAPN1-203ENST00000525013 CST5P28325 142 aaPredicted RBP21.65■■□□□ 1.06
CAPN1-203ENST00000525013 CCSAPQ6IQ19 270 aaPredicted RBP21.65■■□□□ 1.06
CAPN1-203ENST00000525013 CHST3Q7LGC8 479 aa21.65■■□□□ 1.06
CAPN1-203ENST00000525013 SKAP1Q86WV1 359 aa21.65■■□□□ 1.06
CAPN1-203ENST00000525013 GLT1D1Q96MS3 346 aa21.65■■□□□ 1.06
CAPN1-203ENST00000525013 AP5M1Q9H0R1 490 aa21.65■■□□□ 1.06
CAPN1-203ENST00000525013 VTA1Q9NP79 307 aa21.65■■□□□ 1.06
CAPN1-203ENST00000525013 PDLIM7Q9NR12 457 aa21.65■■□□□ 1.06
CAPN1-203ENST00000525013 ASGR1P07306 291 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 SMPD1P17405 629 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 BEX3Q00994 111 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 SART3Q15020 963 aaKnown RBP21.64■■□□□ 1.05
CAPN1-203ENST00000525013 QRICH1Q2TAL8 776 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 IQSEC1Q6DN90 963 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 TAPT1Q6NXT6 567 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 SH3RF1Q7Z6J0 888 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 TLK2Q86UE8 772 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 STAG2Q8N3U4 1231 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 MORC4Q8TE76 937 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 MPHOSPH6Q99547 160 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms