RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 NSMFQ6X4W1 530 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 GTF2IRD2Q86UP8 949 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 TOP6BLQ8N6T0 577 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 DTWD2Q8NBA8 298 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 ADCY4Q8NFM4 1077 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 BTN2A2Q8WVV5 523 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 COPS5Q92905 334 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 FAM83CQ9BQN1 747 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 AARSD1Q9BTE6 412 aaKnown RBP3.86□□□□□ -1.79
LINC01339-204ENST00000524094 ASPNQ9BXN1 380 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 PIDD1Q9HB75 910 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 PICK1Q9NRD5 415 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 DDX56Q9NY93 547 aaKnown RBP3.86□□□□□ -1.79
LINC01339-204ENST00000524094 WHRNQ9P202 907 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 AKT3Q9Y243 479 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 FHOD1Q9Y613 1164 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 DNAJC25-GNG10A0A024R161 153 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 FAM95CA0A1B0GW59 222 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 WDR64B1ANS9 1081 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 IRS4O14654 1257 aaPredicted RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 POU3F2P20265 443 aaPredicted RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 USP11P51784 963 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 IGBP1P78318 339 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 NFKB2Q00653 900 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 TNK2Q07912 1038 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 PCBP1Q15365 356 aaKnown RBP eCLIP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 TESK1Q15569 626 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 NKPD1Q17RQ9 610 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 PRSS53Q2L4Q9 553 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 ABHD17CQ6PCB6 329 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 LHFPL2Q6ZUX7 228 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 C22orf34Q6ZV56 151 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 CLEC10AQ8IUN9 316 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 CCDC103Q8IW40 242 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 NIM1KQ8IY84 436 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 AFAP1L2Q8N4X5 818 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 USHBP1Q8N6Y0 703 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 UBR7Q8N806 425 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 PRPF38AQ8NAV1 312 aaKnown RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 TMEM145Q8NBT3 493 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 FRS2Q8WU20 508 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 DDX1Q92499 740 aaKnown RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 FCRL3Q96P31 734 aaPredicted RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 IER2Q9BTL4 223 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 TARS2Q9BW92 718 aaKnown RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 MRPL4Q9BYD3 311 aaKnown RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 CEP41Q9BYV8 373 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 NKX2-4Q9H2Z4 354 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 SLC52A2Q9HAB3 445 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 SSU72Q9NP77 194 aaKnown RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 CYP26B1Q9NR63 512 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 GFOD1Q9NXC2 390 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 PRR13Q9NZ81 148 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 PLAGL2Q9UPG8 496 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 DIS3Q9Y2L1 958 aaKnown RBP3.85□□□□□ -1.79
LINC01339-204ENST00000524094 NPFFR2Q9Y5X5 522 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 ST14Q9Y5Y6 855 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 CECR2Q9BXF3 1484 aa3.85□□□□□ -1.79
LINC01339-204ENST00000524094 CC2D2AQ9P2K1 1620 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 FAM170BA6NMN3 283 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 H0Y8X5 98 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 IGF2BP3O00425 579 aaKnown RBP eCLIP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 SIGLEC6O43699 453 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 MSCO60682 206 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 KCNH1O95259 989 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 PRAMEF1O95521 474 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 HMGB1P09429 215 aaKnown RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 MYCLP1P12525 358 aaPredicted RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 HOXC12P31275 282 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 SEPT7Q16181 437 aaKnown RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 UVSSAQ2YD98 709 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 PLEKHG6Q3KR16 790 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 RTP2Q5QGT7 225 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 RNF187Q5TA31 235 aaPredicted RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 BEND4Q6ZU67 534 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 ADAT2Q7Z6V5 191 aaKnown RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 DDX42Q86XP3 938 aaKnown RBP eCLIP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 RAVER1Q8IY67 606 aaKnown RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 FIBCD1Q8N539 461 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 FLCNQ8NFG4 579 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 NPLOC4Q8TAT6 608 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 MFSD3Q96ES6 412 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 HDAC8Q9BY41 377 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 MKRN2Q9H000 416 aaKnown RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 CDIP1Q9H305 208 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 PAK6Q9NQU5 681 aaPredicted RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 PLAAQ9Y263 795 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 THRAP3Q9Y2W1 955 aaKnown RBP3.84□□□□□ -1.79
LINC01339-204ENST00000524094 CAPN6Q9Y6Q1 641 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 PHLDB1Q86UU1 1377 aa3.84□□□□□ -1.79
LINC01339-204ENST00000524094 BAZ1BQ9UIG0 1483 aaKnown RBP3.84□□□□□ -1.8
LINC01339-204ENST00000524094 PPM1BO75688 479 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 CLSTN1O94985 981 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 PARNO95453 639 aaKnown RBP3.83□□□□□ -1.8
LINC01339-204ENST00000524094 F13BP05160 661 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 FAM87AP0C7U9 286 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 OXCT1P55809 520 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 HNRNPUQ00839 825 aaKnown RBP eCLIP3.83□□□□□ -1.8
LINC01339-204ENST00000524094 MAP4K2Q12851 820 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 GRB10Q13322 594 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms