RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	ERC1	Q8IUD2	1116 aa		12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	ANKRD35	Q8N283	1001 aa		12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	SDR42E1	Q8WUS8	393 aa		12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	PHOX2B	Q99453	314 aa		12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	TRMT13	Q9NUP7	481 aa	Known RBP	12.95	□□□□□ -0.34
SORBS3-222	ENST00000524057	RAD21	O60216	631 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	HMMR	O75330	724 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	IGHD	P01880	384 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	CHGB	P05060	677 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	IRX6	P78412	446 aa	Predicted RBP	12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	CPXCR1	Q8N123	301 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	CCDC17	Q96LX7	622 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	NUP88	Q99567	741 aa	Predicted RBP	12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	SLF1	Q9BQI6	1058 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	CHMP4B	Q9H444	224 aa	Known RBP	12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	KANSL2	Q9H9L4	492 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	GOPC	Q9HD26	462 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	USP34	Q70CQ2	3546 aa		12.94	□□□□□ -0.34
SORBS3-222	ENST00000524057	LCHN	A4D1U4	455 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	GRXCR2	A6NFK2	248 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	ATP2A1	O14983	1001 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	DCX	O43602	365 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	ZEB2	O60315	1214 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	SMPD1	P17405	629 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	KCNA5	P22460	613 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	CDK8	P49336	464 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	CNTN2	Q02246	1040 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	HSP90AB4P	Q58FF6	505 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	TMEM63B	Q5T3F8	832 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	TLK2	Q86UE8	772 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	PRPF38A	Q8NAV1	312 aa	Known RBP	12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	AP5M1	Q9H0R1	490 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	SUGCT	Q9HAC7	445 aa		12.93	□□□□□ -0.34
SORBS3-222	ENST00000524057	SUPT20HL2	P0C7V6	817 aa		12.92	□□□□□ -0.34
SORBS3-222	ENST00000524057	HDAC1	Q13547	482 aa	Predicted RBP	12.92	□□□□□ -0.34
SORBS3-222	ENST00000524057	SLFNL1	Q499Z3	407 aa		12.92	□□□□□ -0.34
SORBS3-222	ENST00000524057	SLC9C2	Q5TAH2	1124 aa		12.92	□□□□□ -0.34
SORBS3-222	ENST00000524057	HFE2	Q6ZVN8	426 aa		12.92	□□□□□ -0.34
SORBS3-222	ENST00000524057	GDPD5	Q8WTR4	605 aa		12.92	□□□□□ -0.34
SORBS3-222	ENST00000524057	RAVER2	Q9HCJ3	691 aa	Known RBP	12.92	□□□□□ -0.34
SORBS3-222	ENST00000524057	PDGFC	Q9NRA1	345 aa		12.92	□□□□□ -0.34
SORBS3-222	ENST00000524057	TNKS	O95271	1327 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	SALL3	Q9BXA9	1300 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	CYP2D7	A0A087X1C5	515 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	PRKAB2	O43741	272 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	ST18	O60284	1047 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	ZBED4	O75132	1171 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	IQCF3	P0C7M6	154 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	RFC2	P35250	354 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	C12orf60	Q5U649	245 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	TSHZ3	Q63HK5	1081 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	CLASRP	Q8N2M8	674 aa	Known RBP	12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	LCORL	Q8N3X6	602 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	FAM133A	Q8N9E0	248 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	CHST13	Q8NET6	341 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	LRRCC1	Q9C099	1032 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057		Q9Y3F1	56 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	DDX49	Q9Y6V7	483 aa	Known RBP	12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	BRWD1	Q9NSI6	2320 aa		12.91	□□□□□ -0.34
SORBS3-222	ENST00000524057	SOWAHB	A6NEL2	793 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057		F5H6K3	240 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	PDE6A	P16499	860 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	KLRC3	Q07444	240 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	IQSEC1	Q6DN90	963 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	TAPT1	Q6NXT6	567 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	BCL11A	Q9H165	835 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	SLC38A10	Q9HBR0	1119 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	FBXO40	Q9UH90	709 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	MTUS1	Q9ULD2	1270 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	MCM3AP	O60318	1980 aa		12.9	□□□□□ -0.34
SORBS3-222	ENST00000524057	SCN5A	Q14524	2016 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	ZNF536	O15090	1300 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	ZNF532	Q9HCE3	1301 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	TCRBV5S4A2T	A0A5A2	114 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	ATP5J	P18859	108 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	PUS10	Q3MIT2	529 aa	Known RBP	12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	C16orf86	Q6ZW13	317 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	RETREG2	Q8NC44	543 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	NEK9	Q8TD19	979 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	MFSD14A	Q96MC6	490 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	BOLA2	Q9H3K6	86 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	ARMT1	Q9H993	441 aa		12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	CTDP1	Q9Y5B0	961 aa	Predicted RBP	12.89	□□□□□ -0.35
SORBS3-222	ENST00000524057	C19orf67	A6NJJ6	358 aa		12.88	□□□□□ -0.35
SORBS3-222	ENST00000524057	ASB14	A6NK59	587 aa		12.88	□□□□□ -0.35
SORBS3-222	ENST00000524057	USP17L12	C9JPN9	530 aa		12.88	□□□□□ -0.35
SORBS3-222	ENST00000524057	USP17L21	D6R901	530 aa		12.88	□□□□□ -0.35
SORBS3-222	ENST00000524057	BAIAP3	O94812	1187 aa		12.88	□□□□□ -0.35
SORBS3-222	ENST00000524057	ERVK-21	P61565	698 aa		12.88	□□□□□ -0.35
SORBS3-222	ENST00000524057	EEPD1	Q7L9B9	569 aa		12.88	□□□□□ -0.35
SORBS3-222	ENST00000524057	SMC5	Q8IY18	1101 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms