RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 RGS22Q8NE09 1264 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 AMNQ9BXJ7 453 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 AGXT2Q9BYV1 514 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.59□□□□□ -0.073e-7■■■■□ 25.9
VEGFA-225ENST00000523950 UNC93B1Q9H1C4 597 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 CPVLQ9H3G5 476 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 ZSWIM6Q9HCJ5 1215 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 A1CFQ9NQ94 594 aaKnown RBP14.59□□□□□ -0.07
VEGFA-225ENST00000523950 RBM28Q9NW13 759 aaKnown RBP14.59□□□□□ -0.07
VEGFA-225ENST00000523950 FLRT1Q9NZU1 646 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 SMCHD1A6NHR9 2005 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 SYNGAP1Q96PV0 1343 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 LOC102724159A0A0B4J2E5 919 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 POTEB2H3BUK9 544 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 ZBTB43O43298 467 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 MSCO60682 206 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 PGK2P07205 417 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 GJA8P48165 433 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.08
VEGFA-225ENST00000523950 PWP2Q15269 919 aaKnown RBP14.58□□□□□ -0.08
VEGFA-225ENST00000523950 MUM1L1Q5H9M0 696 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 MAMDC4Q6UXC1 1216 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 RUFY3Q7L099 469 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 FAM133AQ8N9E0 248 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 IL17RAQ96F46 866 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 TCEANC2Q96MN5 208 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 TINF2Q9BSI4 451 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 CYP39A1Q9NYL5 469 aa14.58□□□□□ -0.08
VEGFA-225ENST00000523950 MRPL11Q9Y3B7 192 aaKnown RBP14.58□□□□□ -0.08
VEGFA-225ENST00000523950 FRMPD3Q5JV73 1810 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 POTEFA5A3E0 1075 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 CYTH3O43739 400 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 TRIM32Q13049 653 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 Q6ZUG5 572 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 MICU3Q86XE3 530 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 MCF2L2Q86YR7 1114 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 SAMD3Q8N6K7 520 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 FANCBQ8NB91 859 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 CLEC4DQ8WXI8 215 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 MYL10Q9BUA6 226 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 VAT1LQ9HCJ6 419 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 CYP46A1Q9Y6A2 500 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 NID2Q14112 1375 aa14.57□□□□□ -0.08
VEGFA-225ENST00000523950 LCTP09848 1927 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 PNMA6FA0A0J9YX94 578 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 KLF18A0A0U1RQI7 1052 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 NFIBO00712 420 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 SGPL1O95470 568 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 MYCP01106 439 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-225ENST00000523950 CYBAP13498 195 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 CYP2C19P33261 490 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 USH1GQ495M9 461 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 NSMFQ6X4W1 530 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 RNF207Q6ZRF8 634 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 TMTC3Q6ZXV5 915 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 U2AF1L4Q8WU68 220 aaKnown RBP14.56□□□□□ -0.08
VEGFA-225ENST00000523950 CRISPLD2Q9H0B8 497 aa14.56□□□□□ -0.08
VEGFA-225ENST00000523950 MAP3K20Q9NYL2 800 aaKnown RBP14.56□□□□□ -0.08
VEGFA-225ENST00000523950 ADD3Q9UEY8 706 aaKnown RBP14.56□□□□□ -0.08
VEGFA-225ENST00000523950 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 ASB14A6NK59 587 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 CPA1P15085 419 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 EVCP57679 992 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 GHRHRQ02643 423 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 RTN1Q16799 776 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 SLC35G1Q2M3R5 365 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 C8orf34Q49A92 452 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 HOMER1Q86YM7 354 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 ANKLE1Q8NAG6 615 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 BRF1Q92994 677 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 RRP36Q96EU6 259 aaKnown RBP14.55□□□□□ -0.08
VEGFA-225ENST00000523950 FGD4Q96M96 766 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 DEFB118Q96PH6 123 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 PIGSQ96S52 555 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 MPHOSPH6Q99547 160 aaKnown RBP14.55□□□□□ -0.08
VEGFA-225ENST00000523950 SEC63Q9UGP8 760 aaKnown RBP14.55□□□□□ -0.08
VEGFA-225ENST00000523950 BRPF3Q9ULD4 1205 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 CNPY2Q9Y2B0 182 aa14.55□□□□□ -0.08
VEGFA-225ENST00000523950 KIAA0100Q14667 2235 aaKnown RBP14.54□□□□□ -0.08
VEGFA-225ENST00000523950 PTPDC1A2A3K4 754 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 GOLGA8AA7E2F4 631 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 GOLGA8BA8MQT2 603 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 B4DLN1 442 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 SEPT4O43236 478 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 PLEKHA8P1O95397 391 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 RXRAP19793 462 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 CCND3P30281 292 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-225ENST00000523950 MRPL12P52815 198 aaKnown RBP14.54□□□□□ -0.08
VEGFA-225ENST00000523950 RPS6P62753 249 aaKnown RBP14.54□□□□□ -0.08
VEGFA-225ENST00000523950 BAATQ14032 418 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-225ENST00000523950 SRBD1Q8N5C6 995 aaKnown RBP14.54□□□□□ -0.08
VEGFA-225ENST00000523950 DNERQ8NFT8 737 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 DDX20Q9UHI6 824 aaKnown RBP14.54□□□□□ -0.08
VEGFA-225ENST00000523950 PCDHA1Q9Y5I3 950 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 LRRC37A2A6NM11 1700 aa14.54□□□□□ -0.08
VEGFA-225ENST00000523950 BAZ2BQ9UIF8 2168 aaKnown RBP14.53□□□□□ -0.08
VEGFA-225ENST00000523950 MCM3APO60318 1980 aa14.53□□□□□ -0.08
VEGFA-225ENST00000523950 SOWAHBA6NEL2 793 aa14.53□□□□□ -0.08
VEGFA-225ENST00000523950 PPP1R11O60927 126 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-225ENST00000523950 TAL1P17542 331 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms