RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 FGD4Q96M96 766 aa20.16■□□□□ 0.82
CCNC-213ENST00000523541 A0A1W2PPC1 479 aa20.15■□□□□ 0.82
CCNC-213ENST00000523541 PGK1P00558 417 aa20.15■□□□□ 0.82
CCNC-213ENST00000523541 RTP1P59025 263 aa20.15■□□□□ 0.82
CCNC-213ENST00000523541 CNTN2Q02246 1040 aa20.15■□□□□ 0.82
CCNC-213ENST00000523541 MUM1L1Q5H9M0 696 aa20.15■□□□□ 0.82
CCNC-213ENST00000523541 CCDC144CPQ8IYA2 1237 aa20.15■□□□□ 0.82
CCNC-213ENST00000523541 CCDC136Q96JN2 1154 aa20.15■□□□□ 0.82
CCNC-213ENST00000523541 LBHD1Q9BQE6 289 aaPredicted RBP20.15■□□□□ 0.82
CCNC-213ENST00000523541 ESYT1Q9BSJ8 1104 aa20.15■□□□□ 0.82
CCNC-213ENST00000523541 SOWAHBA6NEL2 793 aa20.14■□□□□ 0.81
CCNC-213ENST00000523541 MAGEA10P43363 369 aaPredicted RBP20.14■□□□□ 0.81
CCNC-213ENST00000523541 CASC1Q6TDU7 716 aa20.14■□□□□ 0.81
CCNC-213ENST00000523541 NSMFQ6X4W1 530 aa20.14■□□□□ 0.81
CCNC-213ENST00000523541 CYB5R4Q7L1T6 521 aa20.14■□□□□ 0.81
CCNC-213ENST00000523541 MORC4Q8TE76 937 aa20.14■□□□□ 0.81
CCNC-213ENST00000523541 LENG1Q96BZ8 264 aaPredicted RBP20.14■□□□□ 0.81
CCNC-213ENST00000523541 MPHOSPH6Q99547 160 aaKnown RBP20.14■□□□□ 0.81
CCNC-213ENST00000523541 UBE2OQ9C0C9 1292 aaKnown RBP20.14■□□□□ 0.81
CCNC-213ENST00000523541 SPC25Q9HBM1 224 aa20.14■□□□□ 0.81
CCNC-213ENST00000523541 PHF24Q9UPV7 400 aa20.14■□□□□ 0.81
CCNC-213ENST00000523541 RBM8AQ9Y5S9 174 aaKnown RBP20.14■□□□□ 0.81
CCNC-213ENST00000523541 DNAH12Q6ZR08 3092 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 TRIOBPQ9H2D6 2365 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 B4DLN1 442 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 IFIT3O14879 490 aaKnown RBP20.13■□□□□ 0.81
CCNC-213ENST00000523541 GOLGA8HP0CJ92 632 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 BMP8BP34820 402 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 MRPL12P52815 198 aaKnown RBP20.13■□□□□ 0.81
CCNC-213ENST00000523541 NKX3-2P78367 333 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 MDM2Q00987 491 aaPredicted RBP20.13■□□□□ 0.81
CCNC-213ENST00000523541 TRAF1Q13077 416 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 ADGRF4Q8IZF3 695 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 TMTC2Q8N394 836 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 DNERQ8NFT8 737 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 CLEC4DQ8WXI8 215 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 UBA5Q9GZZ9 404 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 LSG1Q9H089 658 aaKnown RBP20.13■□□□□ 0.81
CCNC-213ENST00000523541 PRO3102Q9H379 93 aa20.13■□□□□ 0.81
CCNC-213ENST00000523541 PRDM5Q9NQX1 630 aaPredicted RBP20.13■□□□□ 0.81
CCNC-213ENST00000523541 MOXD2PA6NHM9 499 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 ADAMTS4O75173 837 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 BAATQ14032 418 aaPredicted RBP20.12■□□□□ 0.81
CCNC-213ENST00000523541 CCDC144BQ3MJ40 725 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 IQSEC1Q6DN90 963 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 SLC39A5Q6ZMH5 540 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 RNF207Q6ZRF8 634 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 NOL8Q76FK4 1167 aaKnown RBP20.12■□□□□ 0.81
CCNC-213ENST00000523541 KLHDC9Q8NEP7 349 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 GDF15Q99988 308 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 KATNBL1Q9H079 304 aa20.12■□□□□ 0.81
CCNC-213ENST00000523541 RANBP2P49792 3224 aaKnown RBP20.12■□□□□ 0.81
CCNC-213ENST00000523541 ABCB11O95342 1321 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 NEFLP07196 543 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 CST5P28325 142 aaPredicted RBP20.11■□□□□ 0.81
CCNC-213ENST00000523541 GJA9P57773 515 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 WTAPQ15007 396 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 SNX17Q15036 470 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 NECTIN1Q15223 517 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 MCF2L2Q86YR7 1114 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 PCSK9Q8NBP7 692 aaKnown RBP20.11■□□□□ 0.81
CCNC-213ENST00000523541 NUP133Q8WUM0 1156 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 MAP3K14Q99558 947 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 VTA1Q9NP79 307 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 PCDH10Q9P2E7 1040 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 Q9Y3F1 56 aa20.11■□□□□ 0.81
CCNC-213ENST00000523541 PTPDC1A2A3K4 754 aa20.1■□□□□ 0.81
CCNC-213ENST00000523541 PALM3A6NDB9 673 aaPredicted RBP20.1■□□□□ 0.81
CCNC-213ENST00000523541 KLRF2D3W0D1 207 aa20.1■□□□□ 0.81
CCNC-213ENST00000523541 NFIBO00712 420 aa20.1■□□□□ 0.81
CCNC-213ENST00000523541 DHX16O60231 1041 aaKnown RBP20.1■□□□□ 0.81
CCNC-213ENST00000523541 CDC37Q16543 378 aaPredicted RBP20.1■□□□□ 0.81
CCNC-213ENST00000523541 TRIM60Q495X7 471 aa20.1■□□□□ 0.81
CCNC-213ENST00000523541 RNF20Q5VTR2 975 aa20.1■□□□□ 0.81
CCNC-213ENST00000523541 SAMD3Q8N6K7 520 aa20.1■□□□□ 0.81
CCNC-213ENST00000523541 IGDCC4Q8TDY8 1250 aa20.1■□□□□ 0.81
CCNC-213ENST00000523541 UPF3AQ9H1J1 476 aaKnown RBP20.1■□□□□ 0.81
CCNC-213ENST00000523541 JMJD4Q9H9V9 463 aa20.1■□□□□ 0.81
CCNC-213ENST00000523541 MAP3K20Q9NYL2 800 aaKnown RBP20.1■□□□□ 0.81
CCNC-213ENST00000523541 MRPL11Q9Y3B7 192 aaKnown RBP20.1■□□□□ 0.81
CCNC-213ENST00000523541 SYNRGQ9UMZ2 1314 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 SMCHD1A6NHR9 2005 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 C6orf222P0C671 652 aaPredicted RBP20.09■□□□□ 0.81
CCNC-213ENST00000523541 MCM5P33992 734 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 TNFAIP2Q03169 654 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 CATIPQ7Z7H3 387 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 FBXO11Q86XK2 927 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 MB21D2Q8IYB1 491 aaPredicted RBP20.09■□□□□ 0.81
CCNC-213ENST00000523541 VTI1AQ96AJ9 217 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 MTMR8Q96EF0 704 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 MAD2L2Q9UI95 211 aa20.09■□□□□ 0.81
CCNC-213ENST00000523541 CDC45O75419 566 aa20.08■□□□□ 0.81
CCNC-213ENST00000523541 ALDH5A1P51649 535 aaPredicted RBP20.08■□□□□ 0.81
CCNC-213ENST00000523541 RPS6P62753 249 aaKnown RBP20.08■□□□□ 0.81
CCNC-213ENST00000523541 TROAPQ12815 778 aa20.08■□□□□ 0.81
CCNC-213ENST00000523541 GRM4Q14833 912 aa20.08■□□□□ 0.81
CCNC-213ENST00000523541 TMEM67Q5HYA8 995 aa20.08■□□□□ 0.81
CCNC-213ENST00000523541 CCSAPQ6IQ19 270 aaPredicted RBP20.08■□□□□ 0.81
CCNC-213ENST00000523541 STOX1Q6ZVD7 989 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms