RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	SMC1B	Q8NDV3	1235 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	WDR66	Q8TBY9	1149 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	MAIP1	Q8WWC4	291 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	HAPLN3	Q96S86	360 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	RUFY1	Q96T51	708 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	DNAJC25	Q9H1X3	360 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	C1orf115	Q9H7X2	142 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	WDR70	Q9NW82	654 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	FAM184B	Q9ULE4	1060 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	GJA3	Q9Y6H8	435 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PSMD14	O00487	310 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CASP14	P31944	242 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CA8	P35219	290 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	VSNL1	P62760	191 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	IFIT5	Q13325	482 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZMYM1	Q5SVZ6	1142 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	IRGC	Q6NXR0	463 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	HOMER1	Q86YM7	354 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	SLF2	Q8IX21	1173 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ENDOV	Q8N8Q3	282 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CCDC148	Q8NFR7	591 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	SPIRE2	Q8WWL2	714 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	KIFAP3	Q92845	792 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PTPRN2	Q92932	1015 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	DHX58	Q96C10	678 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	LRRC45	Q96CN5	670 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PCMTD2	Q9NV79	361 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PDP2	Q9P2J9	529 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	HESX1	Q9UBX0	185 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ATF5	Q9Y2D1	282 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	RTCB	Q9Y3I0	505 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	EMILIN1	Q9Y6C2	1016 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	DIP2C	Q9Y2E4	1556 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CD163L1	Q9NR16	1453 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ACE	P12821	1306 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288		A0A087WZG4	1122 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288		F8W031	263 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	BBOX1	O75936	387 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	SKIV2L2	P42285	1042 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	EPS15	P42566	896 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CTCF	P49711	727 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	SNX1	Q13596	522 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ARID5B	Q14865	1188 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	THEMIS2	Q5TEJ8	643 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	TRAPPC11	Q7Z392	1133 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZNF554	Q86TJ5	538 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ERICH1	Q86X53	443 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	LSMEM2	Q8N112	164 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ATP8B4	Q8TF62	1192 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	NSMCE1	Q8WV22	266 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CCT6B	Q92526	530 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	NACC2	Q96BF6	587 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	EIF2A	Q9BY44	585 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	MKNK2	Q9HBH9	465 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ARHGEF10L	Q9HCE6	1279 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	HYPK	Q9NX55	129 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	TRMT1	Q9NXH9	659 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	RCOR1	Q9UKL0	485 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CFAP45	Q9UL16	551 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	SSX2IP	Q9Y2D8	614 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	SH3GLB1	Q9Y371	365 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ECM29	Q5VYK3	1845 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ASPM	Q8IZT6	3477 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	BPTF	Q12830	3046 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ASAP2	O43150	1006 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	MTRF1	O75570	445 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PARN	O95453	639 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	TCF7	P36402	384 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	GGCX	P38435	758 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	OXCT1	P55809	520 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	MPP3	Q13368	585 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	ANKRD1	Q15327	319 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PPP1R15B	Q5SWA1	713 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PAPD7	Q5XG87	772 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PPP1R42	Q7Z4L9	355 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	LMNTD2	Q8IXW0	634 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	RETREG2	Q8NC44	543 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	AIDA	Q96BJ3	306 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	CCDC134	Q9H6E4	229 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	DACT1	Q9NYF0	836 aa		4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	PAIP2B	Q9ULR5	123 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-225	ENST00000523288	C4A	P0C0L4	1744 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	C4B	P0C0L5	1744 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288		M0R2C6	588 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	CYTH3	O43739	400 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	KRT38	O76015	456 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	TRIM37	O94972	964 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	PRLR	P16471	622 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	ATP6V1C1	P21283	382 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	KIF5B	P33176	963 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZNF131	P52739	623 aa		4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	DNM1	Q05193	864 aa	Known RBP	4.25	□□□□□ -1.73
FAM49B-225	ENST00000523288	FAM160A1	Q05DH4	1040 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms