RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ZSCAN10Q96SZ4 725 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-223ENST00000523125 TSEN34Q9BSV6 310 aaKnown RBP14.54□□□□□ -0.08
VEGFA-223ENST00000523125 ATP11BQ9Y2G3 1177 aa14.54□□□□□ -0.08
VEGFA-223ENST00000523125 RAD50Q92878 1312 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 A0A1W2PQ45 241 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-223ENST00000523125 A0A1W2PQY0 241 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 MYADML2A6NDP7 307 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 NFIBO00712 420 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 GOLGA8HP0CJ92 632 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 MDM2Q00987 491 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-223ENST00000523125 TRIM60Q495X7 471 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 IQCA1Q86XH1 822 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 PNMA1Q8ND90 353 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 CPVLQ9H3G5 476 aa14.53□□□□□ -0.08
VEGFA-223ENST00000523125 COL6A3P12111 3177 aa14.52□□□□□ -0.08
VEGFA-223ENST00000523125 CTAGE5O15320 804 aa14.52□□□□□ -0.09
VEGFA-223ENST00000523125 ACLYP53396 1101 aa14.52□□□□□ -0.09
VEGFA-223ENST00000523125 BAATQ14032 418 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-223ENST00000523125 KCNA10Q16322 511 aa14.52□□□□□ -0.09
VEGFA-223ENST00000523125 CCDC178Q5BJE1 867 aa14.52□□□□□ -0.09
VEGFA-223ENST00000523125 GPATCH4Q5T3I0 446 aaKnown RBP14.52□□□□□ -0.09
VEGFA-223ENST00000523125 NSMFQ6X4W1 530 aa14.52□□□□□ -0.09
VEGFA-223ENST00000523125 TDHQ8IZJ6 230 aa14.52□□□□□ -0.09
VEGFA-223ENST00000523125 MORC4Q8TE76 937 aa14.52□□□□□ -0.09
VEGFA-223ENST00000523125 KRT23Q9C075 422 aa14.52□□□□□ -0.09
VEGFA-223ENST00000523125 UBE2OQ9C0C9 1292 aaKnown RBP14.52□□□□□ -0.09
VEGFA-223ENST00000523125 UPF3AQ9H1J1 476 aaKnown RBP14.52□□□□□ -0.09
VEGFA-223ENST00000523125 TNKSO95271 1327 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 WDR19Q8NEZ3 1342 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-223ENST00000523125 ASB14A6NK59 587 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 SGSM2O43147 1006 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 CYP21A2P08686 494 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 CST5P28325 142 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-223ENST00000523125 GJA9P57773 515 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 NKX3-2P78367 333 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 TLE2Q04725 743 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 SEC23AQ15436 765 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 CYB5R4Q7L1T6 521 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 SH3RF1Q7Z6J0 888 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 RUFY2Q8WXA3 655 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 LRCH3Q96II8 777 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 UBA5Q9GZZ9 404 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 CNNM2Q9H8M5 875 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 PDLIM7Q9NR12 457 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 TAF6LQ9Y6J9 622 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 KIAA1217Q5T5P2 1943 aa14.51□□□□□ -0.09
VEGFA-223ENST00000523125 BAZ2BQ9UIF8 2168 aaKnown RBP14.5□□□□□ -0.09
VEGFA-223ENST00000523125 TRIM43BA6NCK2 446 aa14.5□□□□□ -0.09
VEGFA-223ENST00000523125 C6orf222P0C671 652 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-223ENST00000523125 TNFAIP2Q03169 654 aa14.5□□□□□ -0.09
VEGFA-223ENST00000523125 LRIT3Q3SXY7 679 aa14.5□□□□□ -0.09
VEGFA-223ENST00000523125 TMEM63BQ5T3F8 832 aa14.5□□□□□ -0.09
VEGFA-223ENST00000523125 TAPT1Q6NXT6 567 aa14.5□□□□□ -0.09
VEGFA-223ENST00000523125 TRIM43Q96BQ3 446 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-223ENST00000523125 KAT14Q9H8E8 782 aa14.5□□□□□ -0.09
VEGFA-223ENST00000523125 PDGFCQ9NRA1 345 aa14.5□□□□□ -0.09
VEGFA-223ENST00000523125 GNEQ9Y223 722 aaKnown RBP14.5□□□□□ -0.09
VEGFA-223ENST00000523125 MOXD2PA6NHM9 499 aa14.49□□□□□ -0.09
VEGFA-223ENST00000523125 ASGR1P07306 291 aa14.49□□□□□ -0.09
VEGFA-223ENST00000523125 PTGS1P23219 599 aa14.49□□□□□ -0.09
VEGFA-223ENST00000523125 ALDH5A1P51649 535 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-223ENST00000523125 GNASQ5JWF2 1037 aa14.49□□□□□ -0.09
VEGFA-223ENST00000523125 SLC30A10Q6XR72 485 aa14.49□□□□□ -0.09
VEGFA-223ENST00000523125 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
VEGFA-223ENST00000523125 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
VEGFA-223ENST00000523125 LBHD1Q9BQE6 289 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-223ENST00000523125 PNMA2Q9UL42 364 aa14.49□□□□□ -0.09
VEGFA-223ENST00000523125 PTPDC1A2A3K4 754 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 SMPD1P17405 629 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 ITGB8P26012 769 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 CDK7P50613 346 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 RPS6P62753 249 aaKnown RBP14.48□□□□□ -0.09
VEGFA-223ENST00000523125 FAAP100Q0VG06 881 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 ASPRV1Q53RT3 343 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 IQSEC1Q6DN90 963 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 RNF207Q6ZRF8 634 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 EEPD1Q7L9B9 569 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 ANKRD33Q7Z3H0 272 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 FBXO16Q8IX29 292 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-223ENST00000523125 PCSK9Q8NBP7 692 aaKnown RBP14.48□□□□□ -0.09
VEGFA-223ENST00000523125 MAP4K1Q92918 833 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 UBAC1Q9BSL1 405 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 PRDM5Q9NQX1 630 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-223ENST00000523125 STARD7Q9NQZ5 370 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 ADD3Q9UEY8 706 aaKnown RBP14.48□□□□□ -0.09
VEGFA-223ENST00000523125 PRKAG2Q9UGJ0 569 aa14.48□□□□□ -0.09
VEGFA-223ENST00000523125 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-223ENST00000523125 ELP1O95163 1332 aa14.47□□□□□ -0.09
VEGFA-223ENST00000523125 LOC102724159A0A0B4J2E5 919 aa14.47□□□□□ -0.09
VEGFA-223ENST00000523125 KIAA0355O15063 1070 aa14.47□□□□□ -0.09
VEGFA-223ENST00000523125 PQBP1O60828 265 aaKnown RBP14.47□□□□□ -0.09
VEGFA-223ENST00000523125 PARP1P09874 1014 aaKnown RBP14.47□□□□□ -0.09
VEGFA-223ENST00000523125 CALML3P27482 149 aa14.47□□□□□ -0.09
VEGFA-223ENST00000523125 BEX3Q00994 111 aa14.47□□□□□ -0.09
VEGFA-223ENST00000523125 PWP2Q15269 919 aaKnown RBP14.47□□□□□ -0.09
VEGFA-223ENST00000523125 CDC37Q16543 378 aaPredicted RBP14.47□□□□□ -0.09
VEGFA-223ENST00000523125 USH1GQ495M9 461 aa14.47□□□□□ -0.09
VEGFA-223ENST00000523125 IFIT1BQ5T764 474 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms