RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 TMEM87BQ96K49 555 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 JAKMIP1Q96N16 626 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 PURBQ96QR8 312 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 TINF2Q9BSI4 451 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 JMJD4Q9H9V9 463 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 DDX20Q9UHI6 824 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 PFASO15067 1338 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 WDR19Q8NEZ3 1342 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 MKI67P46013 3256 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 DNAJC25-GNG10A0A024R161 153 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 DDAH1O94760 285 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 HSPA4P34932 840 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 TROAPQ12815 778 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 BAATQ14032 418 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 KRT32Q14532 448 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 ARMCX2Q7L311 632 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 FBXO11Q86XK2 927 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 PAWRQ96IZ0 340 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 FGD4Q96M96 766 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 CYP39A1Q9NYL5 469 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 CNPY2Q9Y2B0 182 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 DIS3Q9Y2L1 958 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 SNX14Q9Y5W7 946 aa9.73□□□□□ -0.85
CTNNA1-231ENST00000521941 ALPK3Q96L96 1907 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 PALM3A6NDB9 673 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 SOWAHBA6NEL2 793 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 SEPT4O43236 478 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 PLEKHA8P1O95397 391 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 CASTP20810 708 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 SLC35G1Q2M3R5 365 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 LHX8Q68G74 356 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 BLOC1S2Q6QNY1 142 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 SYNE3Q6ZMZ3 975 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 RNF207Q6ZRF8 634 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 DHX32Q7L7V1 743 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 EEPD1Q7L9B9 569 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 CMTR1Q8N1G2 835 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 FAM133AQ8N9E0 248 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 CLEC4DQ8WXI8 215 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 PIGSQ96S52 555 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 CRISPLD2Q9H0B8 497 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 OGDHLQ9ULD0 1010 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 ABCB11O95342 1321 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 SYNGAP1Q96PV0 1343 aa9.72□□□□□ -0.85
CTNNA1-231ENST00000521941 KLF18A0A0U1RQI7 1052 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 CYTH3O43739 400 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 MSCO60682 206 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 SNAI1O95863 264 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 IGHA2P01877 340 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 ZNF865P0CJ78 1059 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 AKR1A1P14550 325 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 KIF5BP33176 963 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 LIFRP42702 1097 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 ALDH5A1P51649 535 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 RPS6P62753 249 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 GJC2Q5T442 439 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 Q6ZUG5 572 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 NECAB2Q7Z6G3 386 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 FBXO16Q8IX29 292 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 TMTC2Q8N394 836 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 CCDC82Q8N4S0 544 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 DPF3Q92784 378 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 MTA3Q9BTC8 594 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 AMNQ9BXJ7 453 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 C11orf49Q9H6J7 331 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 PNMA2Q9UL42 364 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 ASTN1O14525 1302 aa9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 TNRC18O15417 2968 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-231ENST00000521941 hCG_1642624A0A1W2PR95 340 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 ASB14A6NK59 587 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 GOLGA8AA7E2F4 631 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 GOLGA8BA8MQT2 603 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 KBTBD13C9JR72 458 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 ZBTB5O15062 677 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 PPP1R11O60927 126 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 PGK1P00558 417 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 CFBP00751 764 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 HMGB1P09429 215 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 CALM1P0DP23 149 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 CALM2P0DP24 149 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 CALM3P0DP25 149 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 RARBP10826 455 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 APOBRQ0VD83 1088 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 ACVR2BQ13705 512 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 TSGA10IPQ3SY00 556 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 APOA5Q6Q788 366 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 MAMDC4Q6UXC1 1216 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 NOL8Q76FK4 1167 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 MSL3Q8N5Y2 521 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 TBC1D5Q92609 795 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 BRF1Q92994 677 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 HTATIP2Q9BUP3 242 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 RIOX1Q9H6W3 641 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 XPNPEP3Q9NQH7 507 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 ADD3Q9UEY8 706 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms