RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 JPH2Q9BR39 696 aaPredicted RBP17.85■□□□□ 0.45
USP42-207ENST00000521713 CAMSAP1Q5T5Y3 1602 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.85■□□□□ 0.45
USP42-207ENST00000521713 CSRNP2Q9H175 543 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 MAGEF1Q9HAY2 307 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 CD209Q9NNX6 404 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 DLC1Q96QB1 1528 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 SPOPO43791 374 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 PFKFB1P16118 471 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 STAT2P52630 851 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 STAMQ92783 540 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 PCK1P35558 622 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 SCRN1Q12765 414 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 LPXNO60711 386 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 FMNL1O95466 1100 aaPredicted RBP17.84■□□□□ 0.45
USP42-207ENST00000521713 LIFRP42702 1097 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 ATP6V0A1Q93050 837 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 CROCC2H7BZ55 1655 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 PRPF6O94906 941 aaKnown RBP17.84■□□□□ 0.45
USP42-207ENST00000521713 TNNI1P19237 187 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 CALCOCO2Q13137 446 aa17.84■□□□□ 0.45
USP42-207ENST00000521713 KRT19P08727 400 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 HSPA1LP34931 641 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 TMEM179Q6ZVK1 233 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 TRIML1Q8N9V2 468 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 CABS1Q96KC9 395 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 PCDHA4Q9UN74 947 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 ZBTB7AO95365 584 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 CD19P15391 556 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 DGKHQ86XP1 1220 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 FAM178BQ8IXR5 827 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 BLZF1Q9H2G9 400 aa17.83■□□□□ 0.45
USP42-207ENST00000521713 CLTCQ00610 1675 aaKnown RBP17.83■□□□□ 0.44
USP42-207ENST00000521713 PTPRUQ92729 1446 aa17.83■□□□□ 0.44
USP42-207ENST00000521713 ADCK5Q3MIX3 580 aa17.83■□□□□ 0.44
USP42-207ENST00000521713 WDR11Q9BZH6 1224 aa17.83■□□□□ 0.44
USP42-207ENST00000521713 TSKSQ9UJT2 592 aa17.83■□□□□ 0.44
USP42-207ENST00000521713 EPHA10Q5JZY3 1008 aa17.83■□□□□ 0.44
USP42-207ENST00000521713 CEP152O94986 1710 aa17.83■□□□□ 0.44
USP42-207ENST00000521713 MCAMP43121 646 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 LIG4P49917 911 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 PTGDRQ13258 359 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 RNF34Q969K3 372 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 SLC10A4Q96EP9 437 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.82■□□□□ 0.44
USP42-207ENST00000521713 TAB2Q9NYJ8 693 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 MADDQ8WXG6 1647 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 EFCAB8A8MWE9 144 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 IFNAR1P17181 557 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 KCTD1Q719H9 257 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 CELF1Q92879 486 aaKnown RBP17.82■□□□□ 0.44
USP42-207ENST00000521713 STRBPQ96SI9 672 aaKnown RBP17.82■□□□□ 0.44
USP42-207ENST00000521713 CUEDC2Q9H467 287 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 GTPBP6O43824 516 aaPredicted RBP17.82■□□□□ 0.44
USP42-207ENST00000521713 CIB2O75838 187 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 CDK8P49336 464 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 PAK2Q13177 524 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 SYDE2Q5VT97 1194 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 SIRT2Q8IXJ6 389 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 MED4Q9NPJ6 270 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 KIAA1468Q9P260 1216 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 ANAPC4Q9UJX5 808 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 SPATA31A1Q5TZJ5 1347 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 CRKP46108 304 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 NFIXQ14938 502 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 PNMA3Q9UL41 463 aa17.82■□□□□ 0.44
USP42-207ENST00000521713 ATP2A2P16615 1042 aaKnown RBP17.81■□□□□ 0.44
USP42-207ENST00000521713 CCDC14Q49A88 953 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 LRCH2Q5VUJ6 765 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 SH2B2O14492 632 aaPredicted RBP17.81■□□□□ 0.44
USP42-207ENST00000521713 NR1I2O75469 434 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 XRCC5P13010 732 aaKnown RBP17.81■□□□□ 0.44
USP42-207ENST00000521713 KRT9P35527 623 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 MTMR3Q13615 1198 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 BARGINQ6ZT62 677 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 SLC17A8Q8NDX2 589 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 UBLCP1Q8WVY7 318 aaPredicted RBP17.81■□□□□ 0.44
USP42-207ENST00000521713 AK8Q96MA6 479 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 SUGCTQ9HAC7 445 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 ACTN4O43707 911 aaKnown RBP17.81■□□□□ 0.44
USP42-207ENST00000521713 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
USP42-207ENST00000521713 CLUL1Q15846 466 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 WHAMMP3Q1A5X7 153 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 AP5M1Q9H0R1 490 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 N4BP1O75113 896 aaKnown RBP17.81■□□□□ 0.44
USP42-207ENST00000521713 PPP2R5AQ15172 486 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 SP8Q8IXZ3 490 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 TMEM63CQ9P1W3 806 aa17.81■□□□□ 0.44
USP42-207ENST00000521713 DTNBO60941 627 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 CCDC51Q96ER9 411 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 NBPF3Q9H094 633 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 ZSWIM5Q9P217 1185 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 PTPRMP28827 1452 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 ECE2O60344 883 aa17.8■□□□□ 0.44
USP42-207ENST00000521713 VIMP08670 466 aaKnown RBP17.8■□□□□ 0.44
USP42-207ENST00000521713 EN1Q05925 392 aaPredicted RBP17.8■□□□□ 0.44
USP42-207ENST00000521713 DMP1Q13316 513 aaPredicted RBP17.8■□□□□ 0.44
USP42-207ENST00000521713 AGTPBP1Q9UPW5 1226 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms