RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 LMOD1P29536 600 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC9-210ENST00000521667 TNIP1Q15025 636 aa20.91■□□□□ 0.94
TRAPPC9-210ENST00000521667 KARSQ15046 597 aaKnown RBP20.91■□□□□ 0.94
TRAPPC9-210ENST00000521667 AK8Q96MA6 479 aa20.91■□□□□ 0.94
TRAPPC9-210ENST00000521667 CCSER1Q9C0I3 900 aa20.91■□□□□ 0.94
TRAPPC9-210ENST00000521667 PSTPIP2Q9H939 334 aa20.91■□□□□ 0.94
TRAPPC9-210ENST00000521667 DISC1Q9NRI5 854 aa20.91■□□□□ 0.94
TRAPPC9-210ENST00000521667 A0A1W2PRG0 241 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 TBC1D12O60347 775 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 CASP1P29466 404 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 UBA7P41226 1012 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 STAT6P42226 847 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 UBE2SQ16763 222 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 NUP88Q99567 741 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 TMEM39BQ9GZU3 492 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 GLT8D2Q9H1C3 349 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 MYOZ2Q9NPC6 264 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 ARFGEF1Q9Y6D6 1849 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 PP2D1A8MPX8 630 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 WNT10BO00744 389 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 BMP3P12645 472 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 TNNI2P48788 182 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 ARHGEF10LQ9HCE6 1279 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 PCDHA1Q9Y5I3 950 aa20.9■□□□□ 0.94
TRAPPC9-210ENST00000521667 GTPBP6O43824 516 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC9-210ENST00000521667 NBPF9Q3BBW0 867 aa20.89■□□□□ 0.93
TRAPPC9-210ENST00000521667 CCDC144BQ3MJ40 725 aa20.89■□□□□ 0.93
TRAPPC9-210ENST00000521667 CT47A1Q5JQC4 288 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC9-210ENST00000521667 STAMQ92783 540 aa20.89■□□□□ 0.93
TRAPPC9-210ENST00000521667 MTRQ99707 1265 aa20.89■□□□□ 0.93
TRAPPC9-210ENST00000521667 XPO4Q9C0E2 1151 aaKnown RBP20.89■□□□□ 0.93
TRAPPC9-210ENST00000521667 IFNKQ9P0W0 207 aa20.89■□□□□ 0.93
TRAPPC9-210ENST00000521667 MMP14P50281 582 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 FANCCQ00597 558 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 SYDE2Q5VT97 1194 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 RRAGBQ5VZM2 374 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 POTEDQ86YR6 584 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 RASSF8Q8NHQ8 419 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 ENOX1Q8TC92 643 aaKnown RBP20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 ZBTB21Q9ULJ3 1066 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 TMEM232C9JQI7 657 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 EDIL3O43854 480 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 ATP1A3P13637 1013 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 ERCC5P28715 1186 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 FMR1Q06787 632 aaKnown RBP eCLIP20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 IKQ13123 557 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 BTNL9Q6UXG8 535 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 CDAN1Q8IWY9 1227 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 MTMR9Q96QG7 549 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 FANCLQ9NW38 375 aa20.88■□□□□ 0.93
TRAPPC9-210ENST00000521667 SHTN1A0MZ66 631 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 CALCRLQ16602 461 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 NAALADL2Q58DX5 795 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 BLZF1Q9H2G9 400 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 PGAP2Q9UHJ9 254 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 TMX2Q9Y320 296 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 LTBP3Q9NS15 1303 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 TDP2O95551 362 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 RPS12P25398 132 aaKnown RBP20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 ECE1P42892 770 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 ZNF280AP59817 542 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 CUL4BQ13620 913 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 PPP4R3AQ6IN85 833 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 CABP7Q86V35 215 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 AMNQ9BXJ7 453 aa20.87■□□□□ 0.93
TRAPPC9-210ENST00000521667 TECP42680 631 aa20.86■□□□□ 0.93
TRAPPC9-210ENST00000521667 ACER1Q8TDN7 264 aa20.86■□□□□ 0.93
TRAPPC9-210ENST00000521667 SLC37A4O43826 429 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 MIGA2Q7L4E1 593 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 FBXO11Q86XK2 927 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 SPICE1Q8N0Z3 855 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 IGSF22Q8N9C0 903 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 CUEDC2Q9H467 287 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 GOPCQ9HD26 462 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 PYCARDQ9ULZ3 195 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 NFE2L3Q9Y4A8 694 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 SERPINC1P01008 464 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 TXKP42681 527 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 MAP3K10Q02779 954 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 KIAA1524Q8TCG1 905 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 RMND1Q9NWS8 449 aa20.85■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L15C9J2P7 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L13C9JLJ4 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L11C9JVI0 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L18D6R9N7 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L22D6RA61 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L17D6RBQ6 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L19D6RCP7 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L20D6RJB6 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 CBFA2T2O43439 604 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 OFD1O75665 1012 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 CAP2P40123 477 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 FXR2P51116 673 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 SNAP25P60880 206 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L24Q0WX57 530 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 USP17L6PQ6QN14 398 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 FILIP1Q7Z7B0 1213 aa20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 TRMT44Q8IYL2 757 aaKnown RBP20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 CACTINQ8WUQ7 758 aaKnown RBP20.84■□□□□ 0.93
TRAPPC9-210ENST00000521667 MED15Q96RN5 788 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms