RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 NPIPB6E9PJ23 425 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 PRKCAP17252 672 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 ERCC5P28715 1186 aaPredicted RBP5.09□□□□□ -1.59
VPS13B-209ENST00000521559 ERVFRD-1P60508 538 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 DLG4P78352 724 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 CYP4F8P98187 520 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 RTP2Q5QGT7 225 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 CIAPIN1Q6FI81 312 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 SLCO6A1Q86UG4 719 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 SIAH1Q8IUQ4 282 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 LRRC56Q8IYG6 542 aaPredicted RBP5.09□□□□□ -1.59
VPS13B-209ENST00000521559 NUP43Q8NFH3 380 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 NOL6Q9H6R4 1146 aaKnown RBP5.09□□□□□ -1.59
VPS13B-209ENST00000521559 CD320Q9NPF0 282 aa5.09□□□□□ -1.59
VPS13B-209ENST00000521559 SMG5Q9UPR3 1016 aaKnown RBP5.09□□□□□ -1.59
VPS13B-209ENST00000521559 TDRD9Q8NDG6 1382 aaKnown RBP5.08□□□□□ -1.6
VPS13B-209ENST00000521559 A0A1W2PQJ5 194 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 FGF10O15520 208 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-209ENST00000521559 CBFA2T2O43439 604 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 KRT1P04264 644 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 CD3EP07766 207 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 CFPP27918 469 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 SRSF3P84103 164 aaKnown RBP5.08□□□□□ -1.6
VPS13B-209ENST00000521559 EEF1DP3Q658K8 133 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 VHLLQ6RSH7 139 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 CRACR2BQ8N4Y2 399 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-209ENST00000521559 RCC1LQ96I51 464 aaKnown RBP5.08□□□□□ -1.6
VPS13B-209ENST00000521559 ZDHHC15Q96MV8 337 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 PLCD4Q9BRC7 762 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 KLHL25Q9H0H3 589 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 KCNK12Q9HB15 430 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 PRDM2Q13029 1718 aa5.08□□□□□ -1.6
VPS13B-209ENST00000521559 MYOCOSA0A1B0GUC4 107 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 ANKRD34BA5PLL1 514 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 RFXAPO00287 272 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 SSBP05455 408 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS13B-209ENST00000521559 TCF3P15923 654 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 ATF4P18848 351 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-209ENST00000521559 GALK1P51570 392 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 ZNF143P52747 638 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-209ENST00000521559 CORO7P57737 925 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 YBX1P67809 324 aaKnown RBP5.07□□□□□ -1.6
VPS13B-209ENST00000521559 GRB10Q13322 594 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 PPP2R5DQ14738 602 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 NR1I3Q14994 352 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 NCAPHQ15003 741 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 ZNF385BQ569K4 471 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 TNNI3KQ59H18 835 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 TMEM52Q8NDY8 209 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 ANAPC16Q96DE5 110 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 FCRL3Q96P31 734 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-209ENST00000521559 APBA2Q99767 749 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 IMPACTQ9P2X3 320 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 SUGT1Q9Y2Z0 365 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 TOP2BQ02880 1626 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 SYNJ1O43426 1573 aa5.07□□□□□ -1.6
VPS13B-209ENST00000521559 ZNF608Q9ULD9 1512 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-209ENST00000521559 AQRO60306 1485 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS13B-209ENST00000521559 TRBV23OR9-2A0A075B6M9 112 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 NUAK1O60285 661 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 EPHX1P07099 455 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 LINC00310P59036 64 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 AMPD2Q01433 879 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 RAB3GAP1Q15042 981 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 RCSD1Q6JBY9 416 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 KIAA1211LQ6NV74 962 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 POMZP3Q6PJE2 187 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 CILP2Q8IUL8 1156 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 TMEM151BQ8IW70 566 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 ADCY4Q8NFM4 1077 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 PTCHD1Q96NR3 888 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 JMJD8Q96S16 334 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 CNOT6Q9ULM6 557 aaKnown RBP5.06□□□□□ -1.6
VPS13B-209ENST00000521559 PCDHB10Q9UN67 800 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 ABCA10Q8WWZ4 1543 aa5.06□□□□□ -1.6
VPS13B-209ENST00000521559 NOP56O00567 594 aaKnown RBP5.05□□□□□ -1.6
VPS13B-209ENST00000521559 AURKAO14965 403 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 ZSCAN22P10073 491 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-209ENST00000521559 L1CAMP32004 1257 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 VIPR1P32241 457 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 SEPHS1P49903 392 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 CBX2Q14781 532 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-209ENST00000521559 FBLN7Q53RD9 439 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 AMIGO3Q86WK7 504 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 ARHGEF39Q8N4T4 335 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 NLGN2Q8NFZ4 835 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 KLHL6Q8WZ60 621 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 FGD4Q96M96 766 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 TNFRSF12AQ9NP84 129 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 PDLIM7Q9NR12 457 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 CGGBP1Q9UFW8 167 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-209ENST00000521559 BACE2Q9Y5Z0 518 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 IRAK3Q9Y616 596 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 KIF27Q86VH2 1401 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 BIVM-ERCC5R4GMW8 1640 aa5.05□□□□□ -1.6
VPS13B-209ENST00000521559 N4BP3O15049 544 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 EFEMP2O95967 443 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 IFNGR1P15260 489 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms