RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CNPY2Q9Y2B0 182 aa24.07■■□□□ 1.44
TRIM35-203ENST00000521253 PLXNA1Q9UIW2 1896 aa24.07■■□□□ 1.44
TRIM35-203ENST00000521253 SOWAHBA6NEL2 793 aa24.06■■□□□ 1.44
TRIM35-203ENST00000521253 ZNF865P0CJ78 1059 aaPredicted RBP24.06■■□□□ 1.44
TRIM35-203ENST00000521253 QRICH1Q2TAL8 776 aa24.06■■□□□ 1.44
TRIM35-203ENST00000521253 USH1GQ495M9 461 aa24.06■■□□□ 1.44
TRIM35-203ENST00000521253 ANO1Q5XXA6 986 aa24.06■■□□□ 1.44
TRIM35-203ENST00000521253 NECAB2Q7Z6G3 386 aa24.06■■□□□ 1.44
TRIM35-203ENST00000521253 NEK1Q96PY6 1258 aa24.06■■□□□ 1.44
TRIM35-203ENST00000521253 LRRC2Q9BYS8 371 aa24.06■■□□□ 1.44
TRIM35-203ENST00000521253 BAATQ14032 418 aaPredicted RBP24.05■■□□□ 1.44
TRIM35-203ENST00000521253 SLC35G1Q2M3R5 365 aa24.05■■□□□ 1.44
TRIM35-203ENST00000521253 ADCK5Q3MIX3 580 aa24.05■■□□□ 1.44
TRIM35-203ENST00000521253 ARMCX2Q7L311 632 aa24.05■■□□□ 1.44
TRIM35-203ENST00000521253 ZNF654Q8IZM8 581 aa24.05■■□□□ 1.44
TRIM35-203ENST00000521253 NUP133Q8WUM0 1156 aa24.05■■□□□ 1.44
TRIM35-203ENST00000521253 PURBQ96QR8 312 aaKnown RBP24.05■■□□□ 1.44
TRIM35-203ENST00000521253 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.05■■□□□ 1.44
TRIM35-203ENST00000521253 ASTN1O14525 1302 aa24.05■■□□□ 1.44
TRIM35-203ENST00000521253 SMCHD1A6NHR9 2005 aa24.05■■□□□ 1.44
TRIM35-203ENST00000521253 REC8O95072 547 aa24.04■■□□□ 1.44
TRIM35-203ENST00000521253 LIFRP42702 1097 aa24.04■■□□□ 1.44
TRIM35-203ENST00000521253 NFXL1Q6ZNB6 911 aa24.04■■□□□ 1.44
TRIM35-203ENST00000521253 CCDC144CPQ8IYA2 1237 aa24.04■■□□□ 1.44
TRIM35-203ENST00000521253 TMTC2Q8N394 836 aa24.04■■□□□ 1.44
TRIM35-203ENST00000521253 KCNB2Q92953 911 aa24.04■■□□□ 1.44
TRIM35-203ENST00000521253 MTMR8Q96EF0 704 aa24.04■■□□□ 1.44
TRIM35-203ENST00000521253 MYL10Q9BUA6 226 aa24.04■■□□□ 1.44
TRIM35-203ENST00000521253 PTPDC1A2A3K4 754 aa24.03■■□□□ 1.44
TRIM35-203ENST00000521253 DDAH1O94760 285 aa24.03■■□□□ 1.44
TRIM35-203ENST00000521253 HSPA4P34932 840 aa24.03■■□□□ 1.44
TRIM35-203ENST00000521253 KRT32Q14532 448 aa24.03■■□□□ 1.44
TRIM35-203ENST00000521253 SLC30A10Q6XR72 485 aa24.03■■□□□ 1.44
TRIM35-203ENST00000521253 FBXO11Q86XK2 927 aa24.03■■□□□ 1.44
TRIM35-203ENST00000521253 HTATIP2Q9BUP3 242 aa24.03■■□□□ 1.44
TRIM35-203ENST00000521253 C11orf49Q9H6J7 331 aa24.03■■□□□ 1.44
TRIM35-203ENST00000521253 ZHX1Q9UKY1 873 aaPredicted RBP24.03■■□□□ 1.44
TRIM35-203ENST00000521253 CCDC69A6NI79 296 aa24.02■■□□□ 1.44
TRIM35-203ENST00000521253 EXOSC10Q01780 885 aaKnown RBP24.02■■□□□ 1.44
TRIM35-203ENST00000521253 ACVR2BQ13705 512 aa24.02■■□□□ 1.44
TRIM35-203ENST00000521253 RNF207Q6ZRF8 634 aa24.02■■□□□ 1.44
TRIM35-203ENST00000521253 DHX32Q7L7V1 743 aaKnown RBP24.02■■□□□ 1.44
TRIM35-203ENST00000521253 MAP3K14Q99558 947 aa24.02■■□□□ 1.44
TRIM35-203ENST00000521253 ABHD16BQ9H3Z7 469 aa24.02■■□□□ 1.44
TRIM35-203ENST00000521253 RIOX1Q9H6W3 641 aa24.02■■□□□ 1.44
TRIM35-203ENST00000521253 DDX49Q9Y6V7 483 aaKnown RBP24.02■■□□□ 1.44
TRIM35-203ENST00000521253 ABCB11O95342 1321 aa24.02■■□□□ 1.44
TRIM35-203ENST00000521253 ASB14A6NK59 587 aa24.01■■□□□ 1.43
TRIM35-203ENST00000521253 ZBTB5O15062 677 aa24.01■■□□□ 1.43
TRIM35-203ENST00000521253 CYTH3O43739 400 aa24.01■■□□□ 1.43
TRIM35-203ENST00000521253 AKR1A1P14550 325 aa24.01■■□□□ 1.43
TRIM35-203ENST00000521253 CALML3P27482 149 aa24.01■■□□□ 1.43
TRIM35-203ENST00000521253 RPS6P62753 249 aaKnown RBP24.01■■□□□ 1.43
TRIM35-203ENST00000521253 DPF3Q92784 378 aa24.01■■□□□ 1.43
TRIM35-203ENST00000521253 TCEANC2Q96MN5 208 aa24.01■■□□□ 1.43
TRIM35-203ENST00000521253 PPP1R11O60927 126 aaPredicted RBP24■■□□□ 1.43
TRIM35-203ENST00000521253 RARBP10826 455 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 COL6A1P12109 1028 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 PRPF38BQ5VTL8 546 aaKnown RBP24■■□□□ 1.43
TRIM35-203ENST00000521253 SGMS1Q86VZ5 419 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 HOMER1Q86YM7 354 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 RGS22Q8NE09 1264 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 CTCFLQ8NI51 663 aaPredicted RBP24■■□□□ 1.43
TRIM35-203ENST00000521253 LENG1Q96BZ8 264 aaPredicted RBP24■■□□□ 1.43
TRIM35-203ENST00000521253 PIGSQ96S52 555 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 AMNQ9BXJ7 453 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 KATNBL1Q9H079 304 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 SNX14Q9Y5W7 946 aa24■■□□□ 1.43
TRIM35-203ENST00000521253 DNM1LO00429 736 aa23.99■■□□□ 1.43
TRIM35-203ENST00000521253 RXRAP19793 462 aa23.99■■□□□ 1.43
TRIM35-203ENST00000521253 KIF5BP33176 963 aa23.99■■□□□ 1.43
TRIM35-203ENST00000521253 GJC2Q5T442 439 aaPredicted RBP23.99■■□□□ 1.43
TRIM35-203ENST00000521253 RAB11FIP4Q86YS3 637 aa23.99■■□□□ 1.43
TRIM35-203ENST00000521253 ARRDC4Q8NCT1 418 aa23.99■■□□□ 1.43
TRIM35-203ENST00000521253 ADD3Q9UEY8 706 aaKnown RBP23.99■■□□□ 1.43
TRIM35-203ENST00000521253 FAM184BQ9ULE4 1060 aa23.99■■□□□ 1.43
TRIM35-203ENST00000521253 MRPL11Q9Y3B7 192 aaKnown RBP23.99■■□□□ 1.43
TRIM35-203ENST00000521253 SLC12A7Q9Y666 1083 aa23.99■■□□□ 1.43
TRIM35-203ENST00000521253 DNAH12Q6ZR08 3092 aa23.99■■□□□ 1.43
TRIM35-203ENST00000521253 FRMPD3Q5JV73 1810 aa23.98■■□□□ 1.43
TRIM35-203ENST00000521253 HMGB1P09429 215 aaKnown RBP23.98■■□□□ 1.43
TRIM35-203ENST00000521253 ALDH5A1P51649 535 aaPredicted RBP23.98■■□□□ 1.43
TRIM35-203ENST00000521253 TBC1D5Q92609 795 aa23.98■■□□□ 1.43
TRIM35-203ENST00000521253 JAKMIP1Q96N16 626 aaKnown RBP23.98■■□□□ 1.43
TRIM35-203ENST00000521253 XPNPEP3Q9NQH7 507 aa23.98■■□□□ 1.43
TRIM35-203ENST00000521253 EPB41L2O43491 1005 aaKnown RBP23.97■■□□□ 1.43
TRIM35-203ENST00000521253 MYCNP04198 464 aaPredicted RBP23.97■■□□□ 1.43
TRIM35-203ENST00000521253 CALM1P0DP23 149 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 CALM2P0DP24 149 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 CALM3P0DP25 149 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 CPA1P15085 419 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 LRRC41Q15345 812 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 CCDC144BQ3MJ40 725 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 MORC4Q8TE76 937 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 MAF1Q9H063 256 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 PCDHA1Q9Y5I3 950 aa23.97■■□□□ 1.43
TRIM35-203ENST00000521253 ADCY6O43306 1168 aa23.96■■□□□ 1.43
TRIM35-203ENST00000521253 PLEKHA8P1O95397 391 aa23.96■■□□□ 1.43
TRIM35-203ENST00000521253 PGK1P00558 417 aa23.96■■□□□ 1.43
TRIM35-203ENST00000521253 MCF2L2Q86YR7 1114 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms