RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 KIF28PB7ZC32 967 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 H0YGN5 161 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 BIN1O00499 593 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 TLR2O60603 784 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 IDH1O75874 414 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 DEXIO95424 95 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 CHGBP05060 677 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 PDE6AP16499 860 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 IFNAR1P17181 557 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 INPP5BP32019 993 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 FXR1P51114 621 aaKnown RBP eCLIP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 LACTBP83111 547 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 TUBB2AQ13885 445 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 ARID5BQ14865 1188 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 NCAPHQ15003 741 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 MTFR1Q15390 333 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 E4F1Q66K89 784 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 TMED8Q6PL24 325 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 SYT10Q6XYQ8 523 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 MICU3Q86XE3 530 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 NOSTRINQ8IVI9 506 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 TBC1D22AQ8WUA7 517 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 LPIN2Q92539 896 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 DPF3Q92784 378 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 SMARCE1Q969G3 411 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 TUBB2BQ9BVA1 445 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 NAA15Q9BXJ9 866 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 PUS7LQ9H0K6 701 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 FOXP1Q9H334 677 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 BRMS1Q9HCU9 246 aa9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 KIAA0100Q14667 2235 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-223ENST00000520520 EFCAB8A8MWE9 144 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 POTEB2H3BUK9 544 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 IFIT3O14879 490 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 FOXP2O15409 715 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 STX10O60499 249 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 PDE8BO95263 885 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 H2AFXP16104 143 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 PSMC4P43686 418 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 AKAP17AQ02040 695 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 PPIL2Q13356 520 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 POSTNQ15063 836 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 PTPAQ15257 358 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 DIXDC1Q155Q3 683 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 RTN1Q16799 776 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 DCAF15Q66K64 600 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 APOBEC3HQ6NTF7 200 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 FBXO38Q6PIJ6 1188 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 TBC1D10CQ8IV04 446 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 RAET1EQ8TD07 263 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 CTAGE1Q96RT6 745 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 SLC26A6Q9BXS9 759 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 ZNF341Q9BYN7 854 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 LY9Q9HBG7 655 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 ZNF532Q9HCE3 1301 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 MYH13Q9UKX3 1938 aa9.78□□□□□ -0.84
CTNNA1-223ENST00000520520 PATL2C9JE40 543 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 PDHXO00330 501 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 SEMA3EO15041 775 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 MMP1P03956 469 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 PCP11498 1178 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 CDK11BP21127 795 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 ERCC5P28715 1186 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 CTGFP29279 349 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 MARCKSP29966 332 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 CASQ1P31415 396 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 MCAMP43121 646 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 PLCD1P51178 756 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 WTAPQ15007 396 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 FILIP1LQ4L180 1135 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 SPECC1LQ69YQ0 1117 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 SHC4Q6S5L8 630 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 MFSD6Q6ZSS7 791 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 VGLL2Q8N8G2 317 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 ANKRD20A12PQ8NF67 263 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 ENOX1Q8TC92 643 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 HOOK2Q96ED9 719 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 ZDHHC15Q96MV8 337 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 MAP3K14Q99558 947 aa9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 BAG1Q99933 345 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-223ENST00000520520 B4E1Z4 1266 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 CALM1P0DP23 149 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 CALM2P0DP24 149 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 CALM3P0DP25 149 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 CYP2C8P10632 490 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 OSBPP22059 807 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 TDO2P48775 406 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 NT5C2P49902 561 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 HDLBPQ00341 1268 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 NFIAQ12857 509 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 GPS2Q13227 327 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 PNOCQ13519 176 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 ARHGAP29Q52LW3 1261 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 AKNAD1Q5T1N1 836 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 NT5DC1Q5TFE4 455 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 CYB5R4Q7L1T6 521 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 FAM83AQ86UY5 434 aa9.76□□□□□ -0.85
CTNNA1-223ENST00000520520 DIS3L2Q8IYB7 885 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms