RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CCDC181Q5TID7 509 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 IQCEQ6IPM2 695 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 UBE2R2Q712K3 238 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 PPIL6Q8IXY8 311 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 ATL2Q8NHH9 583 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 FRS2Q8WU20 508 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 LEO1Q8WVC0 666 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 TCTN2Q96GX1 697 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 ORAI3Q9BRQ5 295 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 SLC12A9Q9BXP2 914 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 GPR27Q9NS67 375 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 STOML1Q9UBI4 398 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 MINPP1Q9UNW1 487 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 ASXL2Q76L83 1435 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 HMX2A2RU54 273 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 FAM155AB1AL88 458 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 MEFVO15553 781 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 BRINP1O60477 761 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 ZNF205O95201 554 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 PARNO95453 639 aaKnown RBP7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 CRTAMO95727 393 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 ENDOUP21128 410 aaKnown RBP7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 LTBRP36941 435 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 NEK4P51957 841 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 GPR85P60893 370 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 KCNAB2Q13303 367 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 ZNF460Q14592 562 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 BRDTQ58F21 947 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 ODR4Q5SWX8 454 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 DUSP27Q5VZP5 1158 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 EEF1DP3Q658K8 133 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 ZCCHC8Q6NZY4 707 aaKnown RBP7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 PKN3Q6P5Z2 889 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 NECAB2Q7Z6G3 386 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 KSR1Q8IVT5 923 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 FCRL3Q96P31 734 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 MTFR1LQ9H019 292 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 TRAF6Q9Y4K3 522 aa7.3□□□□□ -1.24
HMGB1P46-201ENST00000520062 TRBV23OR9-2A0A075B6M9 112 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 RNF225M0QZC1 329 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 RASGRP1O95267 797 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 JMJD7P0C870 316 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 VAV1P15498 845 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 CHRNA4P43681 627 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 SEPHS1P49903 392 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 CPSF6Q16630 551 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 CFAP100Q494V2 611 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 RNF43Q68DV7 783 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 ZNF765Q7L2R6 523 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 THAP5Q7Z6K1 395 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 STRA8Q7Z7C7 330 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 TSPYL5Q86VY4 417 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 KIF18BQ86Y91 864 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 IFNL3Q8IZI9 196 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 LINC00116Q8NCU8 138 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 METTL22Q9BUU2 404 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 PHF20Q9BVI0 1012 aa7.29□□□□□ -1.24
HMGB1P46-201ENST00000520062 ARVCFO00192 962 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 IFNGR1P15260 489 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 CLCN7P51798 805 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 OXCT1P55809 520 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 PCBP3P57721 371 aaKnown RBP7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 EVA1CP58658 441 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 RBM10P98175 930 aaKnown RBP7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 GUCY1A3Q02108 690 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 PCBP1Q15365 356 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 RNF219Q5W0B1 726 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 CDCA2Q69YH5 1023 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 KCNT2Q6UVM3 1135 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 PRR23CQ6ZRP0 262 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 NOL8Q76FK4 1167 aaKnown RBP7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 DDX53Q86TM3 631 aaKnown RBP7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 CD163Q86VB7 1156 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 GPRC5CQ9NQ84 441 aa7.28□□□□□ -1.24
HMGB1P46-201ENST00000520062 FAM170BA6NMN3 283 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 KPNA6O60684 536 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 PLS3P13797 630 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 SEPT7Q16181 437 aaKnown RBP7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 GAB4Q2WGN9 574 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 RNF111Q6ZNA4 994 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 MTDHQ86UE4 582 aaKnown RBP7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 OR2W6PQ8NHA6 318 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 JDP2Q8WYK2 163 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 DIO2Q92813 273 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 MFSD14AQ96MC6 490 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 MMP19Q99542 508 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 CHPF2Q9P2E5 772 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 PCDHA9Q9Y5H5 950 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 PHLDB1Q86UU1 1377 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 WASHC2CQ9Y4E1 1318 aa7.27□□□□□ -1.25
HMGB1P46-201ENST00000520062 C1QTNF9BB2RNN3 333 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 RBAK-RBAKDNI3L0D1 243 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 GPR39O43194 453 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 ZEB2O60315 1214 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 KCNA6P17658 529 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 GUCY2FP51841 1108 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 STRN3Q13033 797 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 NKPD1Q17RQ9 610 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms