RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 FGFR2P21802 821 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 GTF2F1P35269 517 aaKnown RBP eCLIP8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 MLLT3P42568 568 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L24Q0WX57 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 GPNMBQ14956 572 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 ZNF792Q3KQV3 632 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 C8orf58Q8NAV2 365 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 BANK1Q8NDB2 785 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 CHAMP1Q96JM3 812 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 C12orf42Q96LP6 360 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 RIPOR3Q96MK2 946 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 TGS1Q96RS0 853 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 POP1Q99575 1024 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 UPF3AQ9H1J1 476 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 FAM50BQ9Y247 325 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 ASTN1O14525 1302 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 DCDC2BA2VCK2 349 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 LINC01565O15544 149 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 DDX58O95786 925 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 C6orf222P0C671 652 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 VCAM1P19320 739 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 BEX3Q00994 111 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 MCTP2Q6DN12 878 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L2Q6R6M4 530 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 CXCL17Q6UXB2 119 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 WDR66Q8TBY9 1149 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 SPATC1LQ9H0A9 340 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 PTPRSQ13332 1948 aa8.56□□□□□ -1.04
CTNNA1-216ENST00000519489 KIF28PB7ZC32 967 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 DUSP11O75319 330 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 NEFMP07197 916 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 BTDP43251 543 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 GJA9P57773 515 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 WDR5P61964 334 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 PSMC6P62333 389 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 HYAL1Q12794 435 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 SMAD4Q13485 552 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 CAVIN4Q5BKX8 364 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 SHCBP1Q8NEM2 672 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 ACER1Q8TDN7 264 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 KAZALD1Q96I82 304 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 IRX2Q9BZI1 471 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 SMOC2Q9H3U7 446 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 ZBTB21Q9ULJ3 1066 aa8.55□□□□□ -1.04
CTNNA1-216ENST00000519489 MAPK8IP3Q9UPT6 1336 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 LMNAP02545 664 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 PFKMP08237 780 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 ASNSP08243 561 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 NEXNQ0ZGT2 675 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 ITGA7Q13683 1181 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 CCDC57Q2TAC2 916 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 ABRAQ8N0Z2 381 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 TSPYL6Q8N831 410 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 TRMT13Q9NUP7 481 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 R4GN57 208 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 SCN5AQ14524 2016 aa8.54□□□□□ -1.04
CTNNA1-216ENST00000519489 NBEAQ8NFP9 2946 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 SIPA1L1O43166 1804 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 ATAD5Q96QE3 1844 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 PDE8BO95263 885 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 ZNF853P0CG23 659 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 NKX3-2P78367 333 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 PTGDRQ13258 359 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 NEUROD2Q15784 382 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 NBPF20Q3BBV1 942 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 TAF7LQ5H9L4 462 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 KIAA1755Q5JYT7 1200 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 PCSK9Q8NBP7 692 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 PPP1R13LQ8WUF5 828 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 MSLNLQ96KJ4 702 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 RPAP3Q9H6T3 665 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 FAM184BQ9ULE4 1060 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 TET1Q8NFU7 2136 aa8.53□□□□□ -1.04
CTNNA1-216ENST00000519489 LOC400499M0QZD8 3231 aa8.52□□□□□ -1.04
CTNNA1-216ENST00000519489 PI15O43692 258 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 GJB5O95377 273 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 EYA4O95677 639 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 ICAM3P32942 547 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 PTPN21Q16825 1174 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 TIGD5Q53EQ6 642 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 TMEM63BQ5T3F8 832 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 SWT1Q5T5J6 900 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 KIAA0319Q5VV43 1072 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 METTL16Q86W50 562 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 NCAPG2Q86XI2 1143 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 KCNG4Q8TDN1 519 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 RAD9AQ99638 391 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 MTRQ99707 1265 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 ALDH8A1Q9H2A2 487 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 NSUN3Q9H649 340 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 IL21Q9HBE4 155 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 CLEC1BQ9P126 229 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 MROH5Q6ZUA9 1318 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 KIF16BQ96L93 1317 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 SALL1Q9NSC2 1324 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 IGF2RP11717 2491 aa8.52□□□□□ -1.05
CTNNA1-216ENST00000519489 GPR75-ASB3A0A0A6YYF3 556 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms