RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
MTCL1-207ENST00000518815 TUBBP07437 444 aa11.26□□□□□ -0.61
MTCL1-207ENST00000518815 MRPL12P52815 198 aaKnown RBP11.26□□□□□ -0.61
MTCL1-207ENST00000518815 GABPB1Q06547 395 aaPredicted RBP11.26□□□□□ -0.61
MTCL1-207ENST00000518815 NR1I3Q14994 352 aa11.26□□□□□ -0.61
MTCL1-207ENST00000518815 SYCP3Q8IZU3 236 aa11.26□□□□□ -0.61
MTCL1-207ENST00000518815 ERMNQ8TAM6 284 aa11.26□□□□□ -0.61
MTCL1-207ENST00000518815 GOLGA1Q92805 767 aa11.26□□□□□ -0.61
MTCL1-207ENST00000518815 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
MTCL1-207ENST00000518815 ITIH6Q6UXX5 1313 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 KLRF2D3W0D1 207 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 CCNT1O60563 726 aaKnown RBP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 PHACTR2O75167 634 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 TBCAO75347 108 aaKnown RBP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 SMARCA1P28370 1054 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 PRPHP41219 470 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 ADKP55263 362 aaKnown RBP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 SP4Q02446 784 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 FMR1Q06787 632 aaKnown RBP eCLIP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 LRRC47Q8N1G4 583 aaKnown RBP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 NUP58Q9BVL2 599 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 ACBD3Q9H3P7 528 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 EEF1GP26641 437 aaKnown RBP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 C10orf67Q8IYJ2 551 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 NKX2-3Q8TAU0 364 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 ZBTB21Q9ULJ3 1066 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 DOCK2Q92608 1830 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 KCNJ18B7U540 433 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 OR52Z1P0C646 297 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 USP8P40818 1118 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 KCNJ12Q14500 433 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 PTPN21Q16825 1174 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 USH1GQ495M9 461 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.61
MTCL1-207ENST00000518815 GLT8D2Q9H1C3 349 aa11.25□□□□□ -0.61
MTCL1-207ENST00000518815 COPB1P53618 953 aaKnown RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 UBXN1Q04323 297 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 TBX2Q13207 712 aaPredicted RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 EZH2Q15910 746 aaKnown RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 BLZF1Q9H2G9 400 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 DISC1Q9NRI5 854 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 BARHL2Q9NY43 387 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 FRMPD2Q68DX3 1309 aaPredicted RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 DUOX1Q9NRD9 1551 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 CTAGE9A4FU28 777 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 MMP10P09238 476 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 PPP2R3AQ06190 1150 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 KCNB1Q14721 858 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 CNNM4Q6P4Q7 775 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 USP49Q70CQ1 688 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 CABP7Q86V35 215 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 DHTKD1Q96HY7 919 aaPredicted RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 MYO1AQ9UBC5 1043 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 ATP8B1O43520 1251 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 NMT2O60551 498 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 NPR1P16066 1061 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 KRT83P78385 493 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 NEK8Q86SG6 692 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 SCLT1Q96NL6 688 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 CCSER1Q9C0I3 900 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 LIMA1Q9UHB6 759 aaKnown RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
MTCL1-207ENST00000518815 LUC7L2Q9Y383 392 aaKnown RBP11.24□□□□□ -0.61
MTCL1-207ENST00000518815 ERCC3P19447 782 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 KARSQ15046 597 aaKnown RBP11.23□□□□□ -0.61
MTCL1-207ENST00000518815 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
MTCL1-207ENST00000518815 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 SMCO2A6NFE2 343 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
MTCL1-207ENST00000518815 MFAP3LO75121 409 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 CCT6AP40227 531 aaKnown RBP11.23□□□□□ -0.61
MTCL1-207ENST00000518815 INF2Q27J81 1249 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 ASPRV1Q53RT3 343 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 REXO1Q8N1G1 1221 aaKnown RBP11.23□□□□□ -0.61
MTCL1-207ENST00000518815 TC2NQ8N9U0 490 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 TNFRSF25Q93038 417 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 DYNLL2Q96FJ2 89 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 TMEM47Q9BQJ4 181 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 CARD6Q9BX69 1037 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 THAP9Q9H5L6 903 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 ADD3Q9UEY8 706 aaKnown RBP11.23□□□□□ -0.61
MTCL1-207ENST00000518815 ZSCAN20P17040 1043 aaPredicted RBP11.23□□□□□ -0.61
MTCL1-207ENST00000518815 MCM3P25205 808 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
MTCL1-207ENST00000518815 VPS16Q9H269 839 aa11.23□□□□□ -0.61
MTCL1-207ENST00000518815 CD209Q9NNX6 404 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms