RNA–Protein interactions for RNA: ENST00000518738.1

ATP6V1C1-202, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1C1, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-202ENST00000518738 NAT10Q9H0A0 1025 aaKnown RBP16.79■□□□□ 0.28
ATP6V1C1-202ENST00000518738 SMCHD1A6NHR9 2005 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 ACTN4O43707 911 aaKnown RBP16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 PRPHP41219 470 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 MDM2Q00987 491 aaPredicted RBP16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 TRIM44Q96DX7 344 aaPredicted RBP16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 CCDC34Q96HJ3 373 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 TUBE1Q9UJT0 475 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 FOXN1O15353 648 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 POSTNQ15063 836 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 DPCR1Q3MIW9 517 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 USH1GQ495M9 461 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 DCAF15Q66K64 600 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 CHURC1Q8WUH1 139 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 GGA3Q9NZ52 723 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 RNF181Q9P0P0 153 aa16.78■□□□□ 0.28
ATP6V1C1-202ENST00000518738 OR52Z1P0C646 297 aa16.77■□□□□ 0.28
ATP6V1C1-202ENST00000518738 SLFN14P0C7P3 912 aa16.77■□□□□ 0.28
ATP6V1C1-202ENST00000518738 TXLNAP40222 546 aa16.77■□□□□ 0.28
ATP6V1C1-202ENST00000518738 NLRP12P59046 1061 aa16.77■□□□□ 0.28
ATP6V1C1-202ENST00000518738 GINM1Q9NU53 330 aa16.77■□□□□ 0.28
ATP6V1C1-202ENST00000518738 USP17L15C9J2P7 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L13C9JLJ4 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L11C9JVI0 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L18D6R9N7 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L22D6RA61 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L17D6RBQ6 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L19D6RCP7 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L20D6RJB6 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L24Q0WX57 530 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 USP17L6PQ6QN14 398 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PYM1Q9BRP8 204 aaKnown RBP16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PCDHA5Q9Y5H7 936 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 DDNO94850 711 aaPredicted RBP16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 YBX3P16989 372 aaKnown RBP eCLIP16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 IQCB1Q15051 598 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 KIFC2Q96AC6 838 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 DOCK1Q14185 1865 aa16.76■□□□□ 0.27
ATP6V1C1-202ENST00000518738 BECN2A8MW95 431 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PLA2G6O60733 806 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 ADCY5O95622 1261 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 CDC25AP30304 524 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 INPP5BP32019 993 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 HIRAP54198 1017 aaPredicted RBP16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 ISM2Q6H9L7 571 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 FAM160B2Q86V87 743 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 GRAMD1CQ8IYS0 662 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 TRAF1Q13077 416 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 FEM1BQ9UK73 627 aa16.75■□□□□ 0.27
ATP6V1C1-202ENST00000518738 MEIS2O14770 477 aa16.74■□□□□ 0.27
ATP6V1C1-202ENST00000518738 TDP2O95551 362 aa16.74■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PRR29P0C7W0 189 aa16.74■□□□□ 0.27
ATP6V1C1-202ENST00000518738 LMOD1P29536 600 aaPredicted RBP16.74■□□□□ 0.27
ATP6V1C1-202ENST00000518738 SAMD1Q6SPF0 538 aaPredicted RBP16.74■□□□□ 0.27
ATP6V1C1-202ENST00000518738 SMARCE1Q969G3 411 aa16.74■□□□□ 0.27
ATP6V1C1-202ENST00000518738 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
ATP6V1C1-202ENST00000518738 EDIL3O43854 480 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 UBA7P41226 1012 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 AFMP43652 599 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 AP3B2Q13367 1082 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 E2F4Q16254 413 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 CALCRLQ16602 461 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 MCTP2Q6DN12 878 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PPP4R3AQ6IN85 833 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 RASSF8Q8NHQ8 419 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 LPAR1Q92633 364 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PAGE5Q96GU1 130 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 AK8Q96MA6 479 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 WRNIP1Q96S55 665 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PPP2R3BQ9Y5P8 575 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 AP5Z1O43299 807 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 SLC37A4O43826 429 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 NT5DC1Q5TFE4 455 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 CCDC174Q6PII3 467 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 AOPEPQ8N6M6 819 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 MTMR9Q96QG7 549 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 BPIFA3Q9BQP9 254 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 ANO3Q9BYT9 981 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 RANBP17Q9H2T7 1088 aaKnown RBP16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 ZNF112Q9UJU3 913 aa16.73■□□□□ 0.27
ATP6V1C1-202ENST00000518738 PP2D1A8MPX8 630 aa16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 WDR46O15213 610 aaKnown RBP16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 SMC2O95347 1197 aa16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 TAL1P17542 331 aaPredicted RBP16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 TECP42680 631 aa16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 KARSQ15046 597 aaKnown RBP16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 SH3RF1Q7Z6J0 888 aa16.72■□□□□ 0.27
ATP6V1C1-202ENST00000518738 SCYL3Q8IZE3 742 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms