RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 CCDC27Q2M243 656 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 CCDC57Q2TAC2 916 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 DCAF15Q66K64 600 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 MIGA2Q7L4E1 593 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 DIS3LQ8TF46 1054 aaKnown RBP7.59□□□□□ -1.19
PABPC1-207ENST00000518716 TBC1D22AQ8WUA7 517 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 FAM151AQ8WW52 585 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 PAWRQ96IZ0 340 aaKnown RBP7.59□□□□□ -1.19
PABPC1-207ENST00000518716 DEFB118Q96PH6 123 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 PARK7Q99497 189 aaKnown RBP7.59□□□□□ -1.19
PABPC1-207ENST00000518716 CDH23Q9H251 3354 aa7.59□□□□□ -1.2
PABPC1-207ENST00000518716 A0A0G2JLL6 359 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-207ENST00000518716 F6X3S4 739 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 GRM8O00222 908 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 TFRCP02786 760 aaKnown RBP7.58□□□□□ -1.2
PABPC1-207ENST00000518716 RAC1P63000 192 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 FKBP5Q13451 457 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-207ENST00000518716 FZD5Q13467 585 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 PRRT2Q7Z6L0 340 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-207ENST00000518716 WWC1Q8IX03 1113 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 ZDHHC1Q8WTX9 485 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 CNNM1Q9NRU3 951 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 GJD2Q9UKL4 321 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 AFG3L2Q9Y4W6 797 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 NDUFB9Q9Y6M9 179 aa7.58□□□□□ -1.2
PABPC1-207ENST00000518716 UTYO14607 1347 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 IL16Q14005 1332 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 KIF16BQ96L93 1317 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 NEFLP07196 543 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 FGFR2P21802 821 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 MAGEA10P43363 369 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-207ENST00000518716 NFIAQ12857 509 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 RABL6Q3YEC7 729 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-207ENST00000518716 FAM109BQ6ICB4 259 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-207ENST00000518716 CDC42EP5Q6NZY7 148 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 NECAB2Q7Z6G3 386 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 ZFPM1Q8IX07 1006 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 FMR1NBQ8N0W7 255 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-207ENST00000518716 UBE2Q2Q8WVN8 375 aa7.57□□□□□ -1.2
PABPC1-207ENST00000518716 BIN2Q9UBW5 565 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-207ENST00000518716 PTPRFP10586 1907 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 COL2A1P02458 1487 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-207ENST00000518716 MROH5Q6ZUA9 1318 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 PDE8BO95263 885 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 COL6A1P12109 1028 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 PTPRAP18433 802 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 CHAF1AQ13111 956 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-207ENST00000518716 LRRC24Q50LG9 513 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 FASTKD5Q7L8L6 764 aaKnown RBP7.56□□□□□ -1.2
PABPC1-207ENST00000518716 TDHQ8IZJ6 230 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 GUCD1Q96NT3 240 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 KRTAP4-2Q9BYR5 136 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.56□□□□□ -1.2
PABPC1-207ENST00000518716 PRKRIP1Q9H875 184 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-207ENST00000518716 TMOD2Q9NZR1 351 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 OGDHLQ9ULD0 1010 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 DAGLAQ9Y4D2 1042 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 ZHX2Q9Y6X8 837 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 RFX7Q2KHR2 1363 aa7.56□□□□□ -1.2
PABPC1-207ENST00000518716 MAST3O60307 1309 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 ARID1BQ8NFD5 2236 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-207ENST00000518716 PHIPQ8WWQ0 1821 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 TNPO2O14787 897 aaKnown RBP7.55□□□□□ -1.2
PABPC1-207ENST00000518716 ALDH1L1O75891 902 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 SSTR4P31391 388 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 IRAK1P51617 712 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 DDX10Q13206 875 aaKnown RBP7.55□□□□□ -1.2
PABPC1-207ENST00000518716 SLFNL1Q499Z3 407 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 TAF7LQ5H9L4 462 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 MAP3K21Q5TCX8 1036 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.55□□□□□ -1.2
PABPC1-207ENST00000518716 C7orf61Q8IZ16 206 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 SCYL3Q8IZE3 742 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 ANKRD44Q8N8A2 993 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 SUCLG2Q96I99 432 aa7.55□□□□□ -1.2
PABPC1-207ENST00000518716 ZMYND8Q9ULU4 1186 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-207ENST00000518716 LAMA2P24043 3122 aaKnown RBP7.55□□□□□ -1.2
PABPC1-207ENST00000518716 PFASO15067 1338 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 RPTORQ8N122 1335 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 FANCIQ9NVI1 1328 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 PRUNE2Q8WUY3 3088 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 EML1O00423 815 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 NBPF7P0C2Y1 421 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-207ENST00000518716 TAL1P17542 331 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-207ENST00000518716 CD97P48960 835 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 TCP10Q12799 353 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 FAM110CQ1W6H9 321 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 CAVIN4Q5BKX8 364 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 WFDC12Q8WWY7 111 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 IDI2Q9BXS1 227 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 JPH1Q9HDC5 661 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-207ENST00000518716 AGTPBP1Q9UPW5 1226 aa7.54□□□□□ -1.2
PABPC1-207ENST00000518716 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 PLXNB2O15031 1838 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 CTNND1O60716 968 aaKnown RBP7.53□□□□□ -1.2
PABPC1-207ENST00000518716 HMGCRP04035 888 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 SYN1P17600 705 aa7.53□□□□□ -1.2
PABPC1-207ENST00000518716 NOS3P29474 1203 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms