RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ADCY7P51828 1080 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 USH1GQ495M9 461 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 TREML2Q5T2D2 321 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 ATL3Q6DD88 541 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 CCDC174Q6PII3 467 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-203ENST00000517921 GADL1Q6ZQY3 521 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 RASGRP4Q8TDF6 673 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 ATG4CQ96DT6 458 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-203ENST00000517921 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 GDPD2Q9HCC8 539 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 C6orf50Q9HD87 102 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 PCDHA1Q9Y5I3 950 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 WDR81Q562E7 1941 aa12.13□□□□□ -0.47
PABPC1-203ENST00000517921 MCM3APO60318 1980 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 GOLGA6L22H0YM25 854 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 OPLAHO14841 1288 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 ICAM1P05362 532 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 FDX1P10109 184 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 DSG3P32926 999 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 TOB1P50616 345 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-203ENST00000517921 REPS2Q8NFH8 660 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 BICD2Q8TD16 824 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 LEO1Q8WVC0 666 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-203ENST00000517921 CUL5Q93034 780 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 LMBRD1Q9NUN5 540 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 TFIP11Q9UBB9 837 aaKnown RBP12.12□□□□□ -0.47
PABPC1-203ENST00000517921 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 ADAMTS5Q9UNA0 930 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 PCNTO95613 3336 aa12.12□□□□□ -0.47
PABPC1-203ENST00000517921 ELP1O95163 1332 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 ABCB11O95342 1321 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 LRRC37A2A6NM11 1700 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 DOCK3Q8IZD9 2030 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-203ENST00000517921 VWA5AO00534 786 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 HOXA7P31268 230 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-203ENST00000517921 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-203ENST00000517921 CLK2P49760 499 aaKnown RBP12.11□□□□□ -0.47
PABPC1-203ENST00000517921 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-203ENST00000517921 LBX1P52954 281 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 TRAF1Q13077 416 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 SNAPC2Q13487 334 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 UBE2SQ16763 222 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 GPAT2Q6NUI2 795 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 RGMBQ6NW40 437 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 PIK3AP1Q6ZUJ8 805 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
PABPC1-203ENST00000517921 SCAND2PQ9GZW5 306 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-203ENST00000517921 GLT8D2Q9H1C3 349 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 TMEM260Q9NX78 707 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 RTEL1Q9NZ71 1219 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 CFAP45Q9UL16 551 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 AGTPBP1Q9UPW5 1226 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 CLIC4Q9Y696 253 aa12.11□□□□□ -0.47
PABPC1-203ENST00000517921 CCDC194A0A1B0GVG4 234 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 WNT7AO00755 349 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 MEIS2O14770 477 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 ZBED4O75132 1171 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 YEATS4O95619 227 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 CEBPZQ03701 1054 aaKnown RBP12.1□□□□□ -0.47
PABPC1-203ENST00000517921 NOGQ13253 232 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 NBR1Q14596 966 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 COG2Q14746 738 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 CSPP1Q1MSJ5 1256 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 RILPL1Q5EBL4 403 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 JAKMIP3Q5VZ66 844 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 SPRYD7Q5W111 196 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 FASTKD5Q7L8L6 764 aaKnown RBP12.1□□□□□ -0.47
PABPC1-203ENST00000517921 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 PSTPIP2Q9H939 334 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 RAVER2Q9HCJ3 691 aaKnown RBP12.1□□□□□ -0.47
PABPC1-203ENST00000517921 BIN2Q9UBW5 565 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-203ENST00000517921 RCOR1Q9UKL0 485 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 CCPG1Q9ULG6 757 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 NOL7Q9UMY1 257 aaKnown RBP12.1□□□□□ -0.47
PABPC1-203ENST00000517921 MGAMO43451 1857 aa12.1□□□□□ -0.47
PABPC1-203ENST00000517921 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 PRPF40AO75400 957 aaKnown RBP12.09□□□□□ -0.47
PABPC1-203ENST00000517921 CAPN15O75808 1086 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 ZBTB48P10074 688 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-203ENST00000517921 HSPA8P11142 646 aaKnown RBP12.09□□□□□ -0.47
PABPC1-203ENST00000517921 PTMSP20962 102 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 TRAPPC10P48553 1259 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 GTF2A2P52657 109 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 MRPL12P52815 198 aaKnown RBP12.09□□□□□ -0.47
PABPC1-203ENST00000517921 OAZ1P54368 228 aa12.09□□□□□ -0.47
PABPC1-203ENST00000517921 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
PABPC1-203ENST00000517921 PTPAQ15257 358 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms