RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDGFRB-203ENST00000517660 MSL3Q8N5Y2 521 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-203ENST00000517660 RNF41Q9H4P4 317 aaPredicted RBP12.47□□□□□ -0.41
PDGFRB-203ENST00000517660 TRANK1O15050 2925 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 DNAJC25-GNG10A0A024R161 153 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 ZNF213O14771 459 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 CLTBP09497 229 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 TOP1P11387 765 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 IGFBP4P22692 258 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 NT5C2P49902 561 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 LRRC41Q15345 812 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 TKFCQ3LXA3 575 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 KCTD1Q719H9 257 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 IL27Q8NEV9 243 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 DCAF4Q8WV16 495 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 TTC14Q96N46 770 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 CNPY2Q9Y2B0 182 aa12.46□□□□□ -0.41
PDGFRB-203ENST00000517660 GREB1LQ9C091 1923 aaPredicted RBP12.46□□□□□ -0.42
PDGFRB-203ENST00000517660 PLXNA1Q9UIW2 1896 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 KBTBD13C9JR72 458 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 PDE4AP27815 886 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 MAMDC4Q6UXC1 1216 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 ESR2Q92731 530 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 PRR12Q9ULL5 1215 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 A0A0G2JMZ2 1700 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 USP34Q70CQ2 3546 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 MYH8P13535 1937 aa12.45□□□□□ -0.42
PDGFRB-203ENST00000517660 ZNF536O15090 1300 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 TLL1O43897 1013 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 ZNF865P0CJ78 1059 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 RARBP10826 455 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 RAG1P15918 1043 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 TAL1P17542 331 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 FAAP100Q0VG06 881 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 TMEM240Q5SV17 173 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 TBC1D10CQ8IV04 446 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 DSCC1Q9BVC3 393 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 ACAD9Q9H845 621 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 CD320Q9NPF0 282 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 CTNNA3Q9UI47 895 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 MTMR7Q9Y216 660 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 YBX2Q9Y2T7 364 aaKnown RBP12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 ZNF236Q9UL36 1845 aa12.44□□□□□ -0.42
PDGFRB-203ENST00000517660 SNAI1O95863 264 aaPredicted RBP12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 AKR1A1P14550 325 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 SNAP25P60880 206 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 CCDC178Q5BJE1 867 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 TTC22Q5TAA0 569 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 TTBK2Q6IQ55 1244 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 CCDC174Q6PII3 467 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 BTNL9Q6UXG8 535 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 DGKHQ86XP1 1220 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 TRERF1Q96PN7 1200 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 NKX2-4Q9H2Z4 354 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 XPNPEP3Q9NQH7 507 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 HOMER2Q9NSB8 354 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 RNF146Q9NTX7 359 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 FAM184BQ9ULE4 1060 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 PHF24Q9UPV7 400 aa12.43□□□□□ -0.42
PDGFRB-203ENST00000517660 LRRC37A2A6NM11 1700 aa12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 PQBP1O60828 265 aaKnown RBP12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 ALAS1P13196 640 aa12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 NHLH1Q02575 133 aa12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 ACVR2BQ13705 512 aa12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 IMMTQ16891 758 aaKnown RBP12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 SYDE2Q5VT97 1194 aa12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 RNF180Q86T96 592 aa12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 ABHD16BQ9H3Z7 469 aa12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 GPCPD1Q9NPB8 672 aa12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 ZHX1Q9UKY1 873 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-203ENST00000517660 FRMPD2Q68DX3 1309 aaPredicted RBP12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 PGK1P00558 417 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 ICAM1P05362 532 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 PDHBP11177 359 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 GSPT1P15170 499 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 SLC16A2P36021 539 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 CNTN2Q02246 1040 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 RASGRP2Q7LDG7 609 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 IQCA1Q86XH1 822 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 FAM133AQ8N9E0 248 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 RUFY2Q8WXA3 655 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 ANKS1AQ92625 1134 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 FGD4Q96M96 766 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 RANBP17Q9H2T7 1088 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 TMEM39AQ9NV64 488 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 TBX21Q9UL17 535 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 PNMA2Q9UL42 364 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 CCPG1Q9ULG6 757 aa12.41□□□□□ -0.42
PDGFRB-203ENST00000517660 NEDD4P46934 1319 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 A0A1W2PQ45 241 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms