RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 WDR43Q15061 677 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 ELF2Q15723 593 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 SLC4A8Q2Y0W8 1093 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 TBC1D25Q3MII6 688 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 HDXQ7Z353 690 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 MYLK4Q86YV6 388 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 RNF168Q8IYW5 571 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 MYOCDQ8IZQ8 938 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 FAM81AQ8TBF8 368 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 FAM71BQ8TC56 605 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 HNRNPLLQ8WVV9 542 aaKnown RBP5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 GATA6Q92908 595 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 JAKMIP2Q96AA8 810 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 HOOK2Q96ED9 719 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 BICD1Q96G01 975 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 UNC45AQ9H3U1 944 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 NPHS2Q9NP85 383 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 LUC7LQ9NQ29 371 aaKnown RBP5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 TRPV5Q9NQA5 729 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 PRKAG2Q9UGJ0 569 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 KDM5BQ9UGL1 1544 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 REREQ9P2R6 1566 aa5.46□□□□□ -1.54
HMGB1P19-201ENST00000517578 LRRC9Q6ZRR7 1453 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ARAP1Q96P48 1450 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 FYCO1Q9BQS8 1478 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 CLASP1Q7Z460 1538 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 RBM47A0AV96 593 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC151A5D8V7 595 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 TPD52L2O43399 206 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 GADD45BO75293 160 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 IGHA2P01877 340 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 FESP07332 822 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ADH5P11766 374 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 HARSP12081 509 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 FERP16591 822 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZFXP17010 805 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 TPP2P29144 1249 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 GJA8P48165 433 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 USP11P51784 963 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 PLCB3Q01970 1234 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 COL19A1Q14993 1142 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 KIF4BQ2VIQ3 1234 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ARHGAP29Q52LW3 1261 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC92Q53HC0 331 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 SLC30A9Q6PML9 568 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 PAOXQ6QHF9 649 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC73Q6ZRK6 1079 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 CBLL1Q75N03 491 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 SPATA21Q7Z572 469 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZAR1Q86SH2 424 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 SKAP1Q86WV1 359 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 REXO1L1PQ8IX06 675 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 TRMT2AQ8IZ69 625 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 NUP133Q8WUM0 1156 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZFAND2BQ8WV99 257 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 MRFAP1L1Q96HT8 127 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 INTS4Q96HW7 963 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ANKRD27Q96NW4 1050 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 CSRNP1Q96S65 589 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 RUFY1Q96T51 708 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 MOV10L1Q9BXT6 1211 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 NAT10Q9H0A0 1025 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 EHD4Q9H223 541 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 RABEP2Q9H5N1 569 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 NRDE2Q9H7Z3 1164 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 LIN7BQ9HAP6 207 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ATP6V0A4Q9HBG4 840 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 PDRG1Q9NUG6 133 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 TUBA8Q9NY65 449 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 GGA2Q9UJY4 613 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 PYCARDQ9ULZ3 195 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ANGEL1Q9UNK9 670 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 WDR37Q9Y2I8 494 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 ATP8A1Q9Y2Q0 1164 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 THRAP3Q9Y2W1 955 aaKnown RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 CTDP1Q9Y5B0 961 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 RTEL1-TNFRSF6BF6WH68 1400 aa5.45□□□□□ -1.54
HMGB1P19-201ENST00000517578 PARD3Q8TEW0 1356 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 RPAP1Q9BWH6 1393 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ERICH2A1L162 156 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 LUC7L3O95232 432 aaKnown RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ALDH1B1P30837 517 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 GBP2P32456 591 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 GRIA4P48058 902 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 GCLCP48506 637 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 UBE2HP62256 183 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ST5P78524 1137 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ROR2Q01974 943 aaKnown RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 NEXNQ0ZGT2 675 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 TIAM1Q13009 1591 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 LAMB3Q13751 1172 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZNF423Q2M1K9 1284 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 SPRED3Q2MJR0 410 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 LRRFIP1Q32MZ4 808 aaKnown RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 BMP2KLQ5H9B9 411 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 RRP12Q5JTH9 1297 aaKnown RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 SH2D4BQ5SQS7 431 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZKSCAN2Q63HK3 967 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 LRRC31Q6UY01 552 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms