RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CCDC93Q567U6 631 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 BLIDQ8IZY5 108 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 TTC16Q8NEE8 873 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 COL15A1P39059 1388 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 A0A1W2PRG0 241 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 PPIP5K2O43314 1243 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 PRPHP41219 470 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 TRIM65Q6PJ69 517 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 NLRP10Q86W26 655 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 TEKT1Q969V4 418 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 RPGRIP1Q96KN7 1286 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 NAP1L4Q99733 375 aaKnown RBP11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 LY9Q9HBG7 655 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 HEG1Q9ULI3 1381 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 DLGAP5Q15398 846 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 CPDO75976 1380 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 SALL1Q9NSC2 1324 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 PPARDQ03181 441 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 KRT31Q15323 416 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 OTUD6BQ8N6M0 293 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 GIMAP7Q8NHV1 300 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 KIFC2Q96AC6 838 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 FNBP1Q96RU3 617 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 PICK1Q9NRD5 415 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 ZNF804BA4D1E1 1349 aa11.99□□□□□ -0.49
PCDHGA1-202ENST00000517417 ANKRD65E5RJM6 399 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 KRT5P13647 590 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 PPP1R2P41236 205 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 OXER1Q8TDS5 423 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 NDUFAB1O14561 156 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 MAGEA1P43355 309 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 MYCT1Q8N699 235 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 LZTS2Q9BRK4 669 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 RPN1P04843 607 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 SCG2P13521 617 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 BTDP43251 543 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 CFAP58Q5T655 872 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 C8orf74Q6P047 294 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 PSMD1Q99460 953 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 NUP58Q9BVL2 599 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 ALDH1B1P30837 517 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 TPH2Q8IWU9 490 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 SYNE4Q8N205 404 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 IPO4Q8TEX9 1081 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 STRBPQ96SI9 672 aaKnown RBP11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 ZNF408Q9H9D4 720 aa11.98□□□□□ -0.49
PCDHGA1-202ENST00000517417 STK36Q9NRP7 1315 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 B4DLN1 442 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 TRIM66O15016 1216 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 RAD9BQ6WBX8 426 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 NBPF15Q8N660 670 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 RNF26Q9BY78 433 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 RASAL2Q9UJF2 1139 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 FBXO2Q9UK22 296 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 H7C1D1 291 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 GCNT3O95395 438 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 TNFAIP3P21580 790 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 INPP5BP32019 993 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 VSNL1P62760 191 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 FUT8Q9BYC5 575 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 GLT8D2Q9H1C3 349 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 FEZ2Q9UHY8 353 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 PXDNQ92626 1479 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 CYP2D7A0A087X1C5 515 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 A0A1B0GTH6 734 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 EXOC3O60645 756 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 NDUFA10O95299 355 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 SMTNP53814 917 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 GNGT1P63211 74 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 PTPAQ15257 358 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 KRT27Q7Z3Y8 459 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 RASGRP4Q8TDF6 673 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 ABHD10Q9NUJ1 306 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 HPSEQ9Y251 543 aa11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 CHD2O14647 1828 aaKnown RBP11.97□□□□□ -0.49
PCDHGA1-202ENST00000517417 ERFEQ4G0M1 354 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 PCDHA12Q9UN75 941 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 SPOPO43791 374 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 CCT5P48643 541 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 GRIN1Q05586 938 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 PPFIA1Q13136 1202 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 NR1I3Q14994 352 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 RRAGAQ7L523 313 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 LCORLQ8N3X6 602 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 PSTPIP2Q9H939 334 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms