RNA–Protein interactions for RNA: ENST00000517015.1

SNORA48.11-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 89 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.11-201ENST00000517015 SRGAP2CP0DJJ0 459 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 ASPAP45381 313 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 NEK3P51956 506 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 ERVK-21P61565 698 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 SOX4Q06945 474 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 COL9A3Q14050 684 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 SART3Q15020 963 aaKnown RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 PCBP2Q15366 365 aaKnown RBP eCLIP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 GFOD2Q3B7J2 385 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 ATP13A4Q4VNC1 1196 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 NUTM2GQ5VZR2 741 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 IL31Q6EBC2 164 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 DDX53Q86TM3 631 aaKnown RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 DGKHQ86XP1 1220 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 ZC3H7AQ8IWR0 971 aaKnown RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 SMYD4Q8IYR2 804 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 AGGF1Q8N302 714 aaeCLIP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 CISD2Q8N5K1 135 aaKnown RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 SAMD3Q8N6K7 520 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 KREMEN2Q8NCW0 462 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 SYTL5Q8TDW5 730 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 USP33Q8TEY7 942 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 RNF141Q8WVD5 230 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 COL25A1Q9BXS0 654 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 RNF208Q9H0X6 261 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 GPRC5CQ9NQ84 441 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 ANLNQ9NQW6 1124 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 SPTLC3Q9NUV7 552 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 OBP2AQ9NY56 170 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 TMEFF2Q9UIK5 374 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 INTUQ9ULD6 942 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 CEP131Q9UPN4 1083 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 FAM50BQ9Y247 325 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 DAGLAQ9Y4D2 1042 aa3.03□□□□□ -1.92
SNORA48.11-201ENST00000517015 GOLGA6CA6NDK9 693 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 GOLGA6BA6NDN3 693 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 B4E1Z4 1266 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 ARVCFO00192 962 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 TRAF5O00463 557 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 DYNC1LI2O43237 492 aaPredicted RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 ZEB2O60315 1214 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 RFPL1O75677 317 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 SNUPNO95149 360 aaKnown RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 TIAF1O95411 115 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 PRAMEF1O95521 474 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 SOD2P04179 222 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 SCG5P05408 212 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 CKMP06732 381 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 GOLGA6DP0CG33 693 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 LCP1P13796 627 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 IFNGR1P15260 489 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 ATP2A2P16615 1042 aaKnown RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 AMPD1P23109 780 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 HOXC12P31275 282 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 GRIK1P39086 918 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 KRT76Q01546 638 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 DHX8Q14562 1220 aaKnown RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 GRM3Q14832 879 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 ODF1Q14990 250 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 GPAT2Q6NUI2 795 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 C11orf96Q7Z7L8 435 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 MAP4K3Q8IVH8 894 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 CCDC103Q8IW40 242 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 CMIPQ8IY22 773 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 MFSD2AQ8NA29 543 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 C12orf50Q8NA57 414 aaPredicted RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 GALNT6Q8NCL4 622 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 CLRN3Q8NCR9 226 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 C2CD4AQ8NCU7 369 aaPredicted RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 SMG8Q8ND04 991 aaKnown RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 SVIPQ8NHG7 77 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 NPLOC4Q8TAT6 608 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 FRS2Q8WU20 508 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 DCAF4Q8WV16 495 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 EDARADDQ8WWZ3 215 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 FUBP3Q96I24 572 aaKnown RBP eCLIP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 ASPNQ9BXN1 380 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 MS4A5Q9H3V2 200 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 CYP4F12Q9HCS2 524 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 PRDM6Q9NQX0 595 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 ENAMQ9NRM1 1142 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 C14orf119Q9NWQ9 140 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 GOLGA6AQ9NYA3 693 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 PPARGC1AQ9UBK2 798 aaKnown RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 DDX20Q9UHI6 824 aaKnown RBP3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 TAGLN3Q9UI15 199 aa3.02□□□□□ -1.93
SNORA48.11-201ENST00000517015 CNTNAP4Q9C0A0 1308 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 A0A087WZG4 1122 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 SHISA3A0PJX4 238 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 CCDC189A1A4V9 331 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 FAM229AH3BQW9 127 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 ARNTLO00327 626 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 APAF1O14727 1248 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 MEFVO15553 781 aaPredicted RBP3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 H2AFYO75367 372 aaKnown RBP3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 KRT37O76014 449 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 ADAMTS2O95450 1211 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 CPP00450 1065 aa3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 FOSP01100 380 aaPredicted RBP3.01□□□□□ -1.93
SNORA48.11-201ENST00000517015 IFIT2P09913 472 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms