RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 ZKSCAN3Q9BRR0 538 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 TUBGCP2Q9BSJ2 902 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PHF20Q9BVI0 1012 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 FUT8Q9BYC5 575 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PUS3Q9BZE2 481 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCSER1Q9C0I3 900 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 RAB17Q9H0T7 212 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 IL25Q9H293 177 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MMRN2Q9H8L6 949 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARMT1Q9H993 441 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 EHMT1Q9H9B1 1298 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NHEJ1Q9H9Q4 299 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 LY9Q9HBG7 655 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLC24A3Q9HC58 644 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 METTL14Q9HCE5 456 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PDE11AQ9HCR9 933 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ABCB6Q9NP58 842 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SAMSN1Q9NSI8 373 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARPP21Q9UBL0 812 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 STK17AQ9UEE5 414 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ADD3Q9UEY8 706 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 LRWD1Q9UFC0 647 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PARP2Q9UGN5 583 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 RASAL2Q9UJF2 1139 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 FBXO2Q9UK22 296 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 RAB21Q9UL25 225 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PCDHA4Q9UN74 947 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PCDHA12Q9UN75 941 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 L1RE1Q9UN81 338 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 KCNJ14Q9UNX9 436 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 HPS5Q9UPZ3 1129 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 AXIN2Q9Y2T1 843 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 UTP11Q9Y3A2 253 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 DAAM1Q9Y4D1 1078 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PCDHB6Q9Y5E3 794 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 FHOD1Q9Y613 1164 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PARP3Q9Y6F1 533 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NDUFB9Q9Y6M9 179 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SIPA1L3O60292 1781 aaPredicted RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 LRRC37A3O60309 1634 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 PHRF1Q9P1Y6 1649 aaKnown RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 NWD1Q149M9 1564 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARHGAP23Q9P227 1491 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 TNKSO95271 1327 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ABCB11O95342 1321 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 UBN2Q6ZU65 1347 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 A0A1B0GUA9 196 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRAMEF22A3QJZ6 481 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 SMCO2A6NFE2 343 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 SOWAHDA6NJG2 315 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 SRRM3A6NNA2 597 aaPredicted RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC169A6NNP5 214 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 GSG1L2A8MUP6 293 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 TMCO5BA8MYB1 307 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 PPP1R3GB7ZBB8 358 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 USP17L12C9JPN9 530 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 USP17L21D6R901 530 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 MYO1CO00159 1063 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRAF5O00463 557 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 PODXLO00592 558 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 NDUFAB1O14561 156 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 IRF6O14896 467 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 CLGNO14967 610 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 CYP27B1O15528 508 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 SART1O43290 800 aaKnown RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ORC4O43929 436 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZEB2O60315 1214 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCNT1O60563 726 aaKnown RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 PHACTR2O75167 634 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 FLOT1O75955 427 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 RHOBTB3O94955 611 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 TBC1D8O95759 1140 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 LDHBP07195 334 aaKnown RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 BCRP11274 1271 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ATP1A3P13637 1013 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 GCFC2P16383 781 aaKnown RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF18P17022 549 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 HSPA6P17066 643 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 RXRAP19793 462 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 GPTP24298 496 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ANXA13P27216 316 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 CDC27P30260 824 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLC8A1P32418 973 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 GBP2P32456 591 aaPredicted RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 PDE6BP35913 854 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 GJA5P36382 358 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF76P36508 570 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCT6AP40227 531 aaKnown RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRCPP42785 496 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 MCAMP43121 646 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 MATR3P43243 847 aaKnown RBP eCLIP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 PLA2G4AP47712 749 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 NAPAP54920 295 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 CASP7P55210 303 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 RPS8P62241 208 aaKnown RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 ASIC1P78348 528 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 IRX3P78415 501 aaPredicted RBP2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 TFAP4Q01664 338 aa2.28□□□□□ -2.04
RNU1-40P-201ENST00000516816 LMNB2Q03252 620 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms