RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 TNFAIP2Q03169 654 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 CTC1Q2NKJ3 1217 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 EPC2Q52LR7 807 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 TATDN1Q6P1N9 297 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 ATG9AQ7Z3C6 839 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 TLK2Q86UE8 772 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 TMEM105Q8N8V8 129 aa16.3■□□□□ 0.2
SMAD1-216ENST00000515527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMAD1-216ENST00000515527 PITPNM1O00562 1244 aa16.29■□□□□ 0.2
SMAD1-216ENST00000515527 ZBTB22O15209 634 aa16.29■□□□□ 0.2
SMAD1-216ENST00000515527 COPB2P35606 906 aa16.29■□□□□ 0.2
SMAD1-216ENST00000515527 RSPO4Q2I0M5 234 aaPredicted RBP16.29■□□□□ 0.2
SMAD1-216ENST00000515527 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
SMAD1-216ENST00000515527 TBC1D9Q6ZT07 1266 aa16.29■□□□□ 0.2
SMAD1-216ENST00000515527 ADAMTS8Q9UP79 889 aa16.29■□□□□ 0.2
SMAD1-216ENST00000515527 TRIP12Q14669 1992 aaPredicted RBP16.29■□□□□ 0.2
SMAD1-216ENST00000515527 PARP14Q460N5 1801 aa16.29■□□□□ 0.2
SMAD1-216ENST00000515527 MYH1P12882 1939 aa16.28■□□□□ 0.2
SMAD1-216ENST00000515527 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.28■□□□□ 0.2
SMAD1-216ENST00000515527 H3BNC9 293 aa16.28■□□□□ 0.2
SMAD1-216ENST00000515527 APAF1O14727 1248 aa16.28■□□□□ 0.2
SMAD1-216ENST00000515527 CBX2Q14781 532 aaPredicted RBP16.28■□□□□ 0.2
SMAD1-216ENST00000515527 ZBTB33Q86T24 672 aa16.28■□□□□ 0.2
SMAD1-216ENST00000515527 A0A1W2PRG0 241 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 DYNC1LI2O43237 492 aaPredicted RBP16.27■□□□□ 0.2
SMAD1-216ENST00000515527 TBX10O75333 385 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 LMNAP02545 664 aaKnown RBP16.27■□□□□ 0.2
SMAD1-216ENST00000515527 BFSP2Q13515 415 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 SEPT2Q15019 361 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 PTPN21Q16825 1174 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 ARMCX2Q7L311 632 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 ZNF467Q7Z7K2 595 aaPredicted RBP16.27■□□□□ 0.2
SMAD1-216ENST00000515527 SAMD11Q96NU1 681 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 IGFLR1Q9H665 355 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 INSL6Q9Y581 213 aa16.27■□□□□ 0.2
SMAD1-216ENST00000515527 ICAM3P32942 547 aa16.26■□□□□ 0.19
SMAD1-216ENST00000515527 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
SMAD1-216ENST00000515527 HYAL1Q12794 435 aa16.26■□□□□ 0.19
SMAD1-216ENST00000515527 KIAA1755Q5JYT7 1200 aa16.26■□□□□ 0.19
SMAD1-216ENST00000515527 SPICE1Q8N0Z3 855 aa16.26■□□□□ 0.19
SMAD1-216ENST00000515527 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
SMAD1-216ENST00000515527 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
SMAD1-216ENST00000515527 PCDHGC5Q9Y5F6 944 aa16.26■□□□□ 0.19
SMAD1-216ENST00000515527 ATG2AQ2TAZ0 1938 aa16.25■□□□□ 0.19
SMAD1-216ENST00000515527 NDUFV1P49821 464 aa16.25■□□□□ 0.19
SMAD1-216ENST00000515527 KIAA0319Q5VV43 1072 aa16.25■□□□□ 0.19
SMAD1-216ENST00000515527 CNKSR3Q6P9H4 555 aa16.25■□□□□ 0.19
SMAD1-216ENST00000515527 MAGEB6Q8N7X4 407 aa16.25■□□□□ 0.19
SMAD1-216ENST00000515527 LRP2BPQ9P2M1 347 aa16.25■□□□□ 0.19
SMAD1-216ENST00000515527 NLRC5Q86WI3 1866 aa16.25■□□□□ 0.19
SMAD1-216ENST00000515527 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
SMAD1-216ENST00000515527 MPHOSPH10O00566 681 aaKnown RBP16.24■□□□□ 0.19
SMAD1-216ENST00000515527 PTGS1P23219 599 aa16.24■□□□□ 0.19
SMAD1-216ENST00000515527 RFX5P48382 616 aaPredicted RBP16.24■□□□□ 0.19
SMAD1-216ENST00000515527 LRRFIP1Q32MZ4 808 aaKnown RBP16.24■□□□□ 0.19
SMAD1-216ENST00000515527 PCGF6Q9BYE7 350 aa16.24■□□□□ 0.19
SMAD1-216ENST00000515527 INCENPQ9NQS7 918 aa16.24■□□□□ 0.19
SMAD1-216ENST00000515527 GNEQ9Y223 722 aaKnown RBP16.24■□□□□ 0.19
SMAD1-216ENST00000515527 ABHD14A-ACY1A0A1B0GW23 586 aa16.23■□□□□ 0.19
SMAD1-216ENST00000515527 LINC01565O15544 149 aa16.23■□□□□ 0.19
SMAD1-216ENST00000515527 GTF2F1P35269 517 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMAD1-216ENST00000515527 MCAMP43121 646 aa16.23■□□□□ 0.19
SMAD1-216ENST00000515527 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
SMAD1-216ENST00000515527 PI16Q6UXB8 463 aa16.23■□□□□ 0.19
SMAD1-216ENST00000515527 CCDC144CPQ8IYA2 1237 aa16.23■□□□□ 0.19
SMAD1-216ENST00000515527 ZNF214Q9UL59 606 aaPredicted RBP16.23■□□□□ 0.19
SMAD1-216ENST00000515527 NOD1Q9Y239 953 aa16.23■□□□□ 0.19
SMAD1-216ENST00000515527 VWA5AO00534 786 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 EYA4O95677 639 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 RRP1P56182 461 aaKnown RBP16.22■□□□□ 0.19
SMAD1-216ENST00000515527 TIMM10P62072 90 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 ASTLQ6HA08 431 aaPredicted RBP16.22■□□□□ 0.19
SMAD1-216ENST00000515527 NAA16Q6N069 864 aaPredicted RBP16.22■□□□□ 0.19
SMAD1-216ENST00000515527 TMEM192Q8IY95 271 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 PHF7Q9BWX1 381 aaPredicted RBP16.22■□□□□ 0.19
SMAD1-216ENST00000515527 KATNBL1Q9H079 304 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 SEMA4AQ9H3S1 761 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 FBXO28Q9NVF7 368 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 HMG20BQ9P0W2 317 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 ADAMTS5Q9UNA0 930 aa16.22■□□□□ 0.19
SMAD1-216ENST00000515527 EFCAB14O75071 495 aa16.21■□□□□ 0.19
SMAD1-216ENST00000515527 PPP4CP60510 307 aa16.21■□□□□ 0.19
SMAD1-216ENST00000515527 IKBKEQ14164 716 aa16.21■□□□□ 0.19
SMAD1-216ENST00000515527 SPATA5Q8NB90 893 aa16.21■□□□□ 0.19
SMAD1-216ENST00000515527 MSLNLQ96KJ4 702 aa16.21■□□□□ 0.19
SMAD1-216ENST00000515527 EHD4Q9H223 541 aa16.21■□□□□ 0.19
SMAD1-216ENST00000515527 MICAL3Q7RTP6 2002 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 WDR46O15213 610 aaKnown RBP16.2■□□□□ 0.18
SMAD1-216ENST00000515527 CIAO1O76071 339 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 CSPG5O95196 566 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 SMPD1P17405 629 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 SHMT1P34896 483 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 DMWDQ09019 674 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
SMAD1-216ENST00000515527 SNRNP48Q6IEG0 339 aaKnown RBP16.2■□□□□ 0.18
SMAD1-216ENST00000515527 FBXO11Q86XK2 927 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 CCDC155Q8N6L0 562 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 CYP2W1Q8TAV3 490 aa16.2■□□□□ 0.18
SMAD1-216ENST00000515527 PPP1R13LQ8WUF5 828 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms