RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 NDUFB10O96000 172 aa17.81■□□□□ 0.44
TNPO1-210ENST00000515483 CYP2C9P11712 490 aa17.81■□□□□ 0.44
TNPO1-210ENST00000515483 SMPD1P17405 629 aa17.81■□□□□ 0.44
TNPO1-210ENST00000515483 SSTR3P32745 418 aaPredicted RBP17.81■□□□□ 0.44
TNPO1-210ENST00000515483 ERC1Q8IUD2 1116 aa17.81■□□□□ 0.44
TNPO1-210ENST00000515483 FAM133AQ8N9E0 248 aa17.81■□□□□ 0.44
TNPO1-210ENST00000515483 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
TNPO1-210ENST00000515483 UBE2ZQ9H832 354 aaPredicted RBP17.81■□□□□ 0.44
TNPO1-210ENST00000515483 NYAP2Q9P242 653 aa17.81■□□□□ 0.44
TNPO1-210ENST00000515483 TNKSO95271 1327 aa17.8■□□□□ 0.44
TNPO1-210ENST00000515483 GOLIM4O00461 696 aa17.8■□□□□ 0.44
TNPO1-210ENST00000515483 ARHGEF15O94989 841 aa17.8■□□□□ 0.44
TNPO1-210ENST00000515483 MBD4O95243 580 aa17.8■□□□□ 0.44
TNPO1-210ENST00000515483 RETREG2Q8NC44 543 aa17.8■□□□□ 0.44
TNPO1-210ENST00000515483 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
TNPO1-210ENST00000515483 ACAD9Q9H845 621 aa17.8■□□□□ 0.44
TNPO1-210ENST00000515483 TRMT13Q9NUP7 481 aaKnown RBP17.8■□□□□ 0.44
TNPO1-210ENST00000515483 FEM1BQ9UK73 627 aa17.8■□□□□ 0.44
TNPO1-210ENST00000515483 COG6Q9Y2V7 657 aa17.8■□□□□ 0.44
TNPO1-210ENST00000515483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.79■□□□□ 0.44
TNPO1-210ENST00000515483 BAIAP3O94812 1187 aa17.79■□□□□ 0.44
TNPO1-210ENST00000515483 FDX1P10109 184 aa17.79■□□□□ 0.44
TNPO1-210ENST00000515483 LEXMQ3ZCV2 418 aa17.79■□□□□ 0.44
TNPO1-210ENST00000515483 FBXL18Q96ME1 805 aa17.79■□□□□ 0.44
TNPO1-210ENST00000515483 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.79■□□□□ 0.44
TNPO1-210ENST00000515483 HOMER2Q9NSB8 354 aa17.79■□□□□ 0.44
TNPO1-210ENST00000515483 POLR3EQ9NVU0 708 aa17.79■□□□□ 0.44
TNPO1-210ENST00000515483 TNNQ9UQP3 1299 aa17.79■□□□□ 0.44
TNPO1-210ENST00000515483 BRWD1Q9NSI6 2320 aa17.78■□□□□ 0.44
TNPO1-210ENST00000515483 MYH8P13535 1937 aa17.78■□□□□ 0.44
TNPO1-210ENST00000515483 PITPNM1O00562 1244 aa17.78■□□□□ 0.44
TNPO1-210ENST00000515483 KCNJ6P48051 423 aa17.78■□□□□ 0.44
TNPO1-210ENST00000515483 TMEM57Q8N5G2 664 aa17.78■□□□□ 0.44
TNPO1-210ENST00000515483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.78■□□□□ 0.44
TNPO1-210ENST00000515483 DNAJC2Q99543 621 aaKnown RBP17.78■□□□□ 0.44
TNPO1-210ENST00000515483 MCM3APO60318 1980 aa17.78■□□□□ 0.44
TNPO1-210ENST00000515483 ZNF536O15090 1300 aa17.77■□□□□ 0.44
TNPO1-210ENST00000515483 SOWAHBA6NEL2 793 aa17.77■□□□□ 0.44
TNPO1-210ENST00000515483 IQCF3P0C7M6 154 aa17.77■□□□□ 0.44
TNPO1-210ENST00000515483 CTR9Q6PD62 1173 aa17.77■□□□□ 0.44
TNPO1-210ENST00000515483 GDPD5Q8WTR4 605 aa17.77■□□□□ 0.44
TNPO1-210ENST00000515483 ZBED2Q9BTP6 218 aa17.77■□□□□ 0.44
TNPO1-210ENST00000515483 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
TNPO1-210ENST00000515483 A1CFQ9NQ94 594 aaKnown RBP17.77■□□□□ 0.44
TNPO1-210ENST00000515483 GPHNQ9NQX3 736 aaPredicted RBP17.77■□□□□ 0.44
TNPO1-210ENST00000515483 PDGFCQ9NRA1 345 aa17.77■□□□□ 0.44
TNPO1-210ENST00000515483 DCXO43602 365 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 KCNA5P22460 613 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 ADD2P35612 726 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 BFSP2Q13515 415 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 PUS10Q3MIT2 529 aaKnown RBP17.76■□□□□ 0.43
TNPO1-210ENST00000515483 TAPT1Q6NXT6 567 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.76■□□□□ 0.43
TNPO1-210ENST00000515483 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNPO1-210ENST00000515483 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 VTA1Q9NP79 307 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 CLIP2Q9UDT6 1046 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 SLC4A4Q9Y6R1 1079 aa17.76■□□□□ 0.43
TNPO1-210ENST00000515483 PTGS1P23219 599 aa17.75■□□□□ 0.43
TNPO1-210ENST00000515483 CPT1AP50416 773 aa17.75■□□□□ 0.43
TNPO1-210ENST00000515483 TKFCQ3LXA3 575 aa17.75■□□□□ 0.43
TNPO1-210ENST00000515483 PTCRAQ6ISU1 281 aaPredicted RBP17.75■□□□□ 0.43
TNPO1-210ENST00000515483 KIAA1211Q6ZU35 1233 aa17.75■□□□□ 0.43
TNPO1-210ENST00000515483 EEPD1Q7L9B9 569 aa17.75■□□□□ 0.43
TNPO1-210ENST00000515483 SPRED2Q7Z698 418 aa17.75■□□□□ 0.43
TNPO1-210ENST00000515483 FBXO16Q8IX29 292 aaPredicted RBP17.75■□□□□ 0.43
TNPO1-210ENST00000515483 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
TNPO1-210ENST00000515483 MTG1Q9BT17 334 aaPredicted RBP17.75■□□□□ 0.43
TNPO1-210ENST00000515483 RNF146Q9NTX7 359 aa17.75■□□□□ 0.43
TNPO1-210ENST00000515483 ARPP21Q9UBL0 812 aaPredicted RBP17.75■□□□□ 0.43
TNPO1-210ENST00000515483 SYNPO2Q9UMS6 1093 aa17.75■□□□□ 0.43
TNPO1-210ENST00000515483 ZBED9Q6R2W3 1325 aa17.74■□□□□ 0.43
TNPO1-210ENST00000515483 PURAQ00577 322 aaKnown RBP17.74■□□□□ 0.43
TNPO1-210ENST00000515483 DUSP28Q4G0W2 176 aa17.74■□□□□ 0.43
TNPO1-210ENST00000515483 BRDTQ58F21 947 aaPredicted RBP17.74■□□□□ 0.43
TNPO1-210ENST00000515483 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
TNPO1-210ENST00000515483 FAM47CQ5HY64 1035 aa17.74■□□□□ 0.43
TNPO1-210ENST00000515483 TGS1Q96RS0 853 aaKnown RBP17.74■□□□□ 0.43
TNPO1-210ENST00000515483 SUGCTQ9HAC7 445 aa17.74■□□□□ 0.43
TNPO1-210ENST00000515483 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
TNPO1-210ENST00000515483 POTEB3A0JP26 581 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 LCHNA4D1U4 455 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
TNPO1-210ENST00000515483 GRXCR2A6NFK2 248 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 MYL3P08590 195 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 IL9P15248 144 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 RASA1P20936 1047 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 LRRFIP1Q32MZ4 808 aaKnown RBP17.73■□□□□ 0.43
TNPO1-210ENST00000515483 ZKSCAN2Q63HK3 967 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 NFRKBQ6P4R8 1299 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 POTEBQ6S5H4 581 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 MKL1Q969V6 931 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 TRERF1Q96PN7 1200 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 IL1RAPL2Q9NP60 686 aa17.73■□□□□ 0.43
TNPO1-210ENST00000515483 BMP3P12645 472 aa17.72■□□□□ 0.43
TNPO1-210ENST00000515483 ERVK-21P61565 698 aa17.72■□□□□ 0.43
TNPO1-210ENST00000515483 PTPN11Q06124 597 aaPredicted RBP17.72■□□□□ 0.43
TNPO1-210ENST00000515483 NBPF20Q3BBV1 942 aa17.72■□□□□ 0.43
TNPO1-210ENST00000515483 SLFNL1Q499Z3 407 aa17.72■□□□□ 0.43
TNPO1-210ENST00000515483 TMEM63BQ5T3F8 832 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms