RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 SOWAHBA6NEL2 793 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 M0R2C6 588 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 IKQ13123 557 aaPredicted RBP18.73■□□□□ 0.59
LMNA-223ENST00000515459 ITGA7Q13683 1181 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 ADGRE1Q14246 886 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 LRRFIP1Q32MZ4 808 aaKnown RBP18.73■□□□□ 0.59
LMNA-223ENST00000515459 TKFCQ3LXA3 575 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 MIER1Q8N108 512 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 AGBL1Q96MI9 1066 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 TRERF1Q96PN7 1200 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 NACAP1Q9BZK3 213 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 SLC28A3Q9HAS3 691 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 ZNF536O15090 1300 aa18.73■□□□□ 0.59
LMNA-223ENST00000515459 ZEB2O60315 1214 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 SLC3A2P08195 630 aaKnown RBP18.72■□□□□ 0.59
LMNA-223ENST00000515459 COL9A1P20849 921 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 IGFBP4P22692 258 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 SLC1A4P43007 532 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 MRPS5P82675 430 aaKnown RBP18.72■□□□□ 0.59
LMNA-223ENST00000515459 CCDC85BQ15834 202 aaPredicted RBP18.72■□□□□ 0.59
LMNA-223ENST00000515459 OTOP2Q7RTS6 562 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 STAG1Q8WVM7 1258 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 GMCL1Q96IK5 515 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 NKX2-4Q9H2Z4 354 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 UMODL1Q5DID0 1318 aa18.72■□□□□ 0.59
LMNA-223ENST00000515459 MUC3AQ02505 3323 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 DYNC1LI2O43237 492 aaPredicted RBP18.71■□□□□ 0.59
LMNA-223ENST00000515459 ALAS1P13196 640 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 SMPD1P17405 629 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 CCL23P55773 120 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 TFAP4Q01664 338 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 TSHZ3Q63HK5 1081 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 IQSEC1Q6DN90 963 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 NOC4LQ9BVI4 516 aaKnown RBP18.71■□□□□ 0.59
LMNA-223ENST00000515459 Q9Y3F1 56 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 GRIN2DO15399 1336 aa18.71■□□□□ 0.59
LMNA-223ENST00000515459 B4GALT4O60513 344 aa18.7■□□□□ 0.58
LMNA-223ENST00000515459 PLA2G6O60733 806 aa18.7■□□□□ 0.58
LMNA-223ENST00000515459 MCCP23508 829 aa18.7■□□□□ 0.58
LMNA-223ENST00000515459 PPP4R3BQ5MIZ7 849 aa18.7■□□□□ 0.58
LMNA-223ENST00000515459 EEPD1Q7L9B9 569 aa18.7■□□□□ 0.58
LMNA-223ENST00000515459 RPUSD2Q8IZ73 545 aaKnown RBP18.7■□□□□ 0.58
LMNA-223ENST00000515459 ADAMTS19Q8TE59 1207 aa18.7■□□□□ 0.58
LMNA-223ENST00000515459 NAPBQ9H115 298 aa18.7■□□□□ 0.58
LMNA-223ENST00000515459 TRPV6Q9H1D0 765 aa18.7■□□□□ 0.58
LMNA-223ENST00000515459 YBX2Q9Y2T7 364 aaKnown RBP18.7■□□□□ 0.58
LMNA-223ENST00000515459 PPARAQ07869 468 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 TAPT1Q6NXT6 567 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 KCTD1Q719H9 257 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 FBXO16Q8IX29 292 aaPredicted RBP18.69■□□□□ 0.58
LMNA-223ENST00000515459 IL27Q8NEV9 243 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 CHMP4CQ96CF2 233 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 WNT8AQ9H1J5 351 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 PDGFCQ9NRA1 345 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 CYP39A1Q9NYL5 469 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 STX8Q9UNK0 236 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 SLC4A7Q9Y6M7 1214 aa18.69■□□□□ 0.58
LMNA-223ENST00000515459 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
LMNA-223ENST00000515459 LCTP09848 1927 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 PTGS1P23219 599 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 PSMC6P62333 389 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 MUM1L1Q5H9M0 696 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 PPP2R2DQ66LE6 453 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 RCSD1Q6JBY9 416 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 UHRF1Q96T88 793 aaPredicted RBP18.68■□□□□ 0.58
LMNA-223ENST00000515459 SEC62Q99442 399 aaKnown RBP18.68■□□□□ 0.58
LMNA-223ENST00000515459 TSPYL2Q9H2G4 693 aaPredicted RBP18.68■□□□□ 0.58
LMNA-223ENST00000515459 DCTPP1Q9H773 170 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 VTA1Q9NP79 307 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 RCAN3Q9UKA8 241 aa18.68■□□□□ 0.58
LMNA-223ENST00000515459 CHD9Q3L8U1 2897 aa18.67■□□□□ 0.58
LMNA-223ENST00000515459 RABGGTBP53611 331 aa18.67■□□□□ 0.58
LMNA-223ENST00000515459 SNAP25P60880 206 aa18.67■□□□□ 0.58
LMNA-223ENST00000515459 NSMFQ6X4W1 530 aa18.67■□□□□ 0.58
LMNA-223ENST00000515459 KIAA1211Q6ZU35 1233 aa18.67■□□□□ 0.58
LMNA-223ENST00000515459 CCPG1Q9ULG6 757 aa18.67■□□□□ 0.58
LMNA-223ENST00000515459 PRR12Q9ULL5 1215 aa18.67■□□□□ 0.58
LMNA-223ENST00000515459 PCDHA11Q9Y5I1 949 aa18.67■□□□□ 0.58
LMNA-223ENST00000515459 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
LMNA-223ENST00000515459 ZBBXA8MT70 800 aa18.66■□□□□ 0.58
LMNA-223ENST00000515459 TMEM63BQ5T3F8 832 aa18.66■□□□□ 0.58
LMNA-223ENST00000515459 C20orf194Q5TEA3 1177 aa18.66■□□□□ 0.58
LMNA-223ENST00000515459 MORC4Q8TE76 937 aa18.66■□□□□ 0.58
LMNA-223ENST00000515459 SCLYQ96I15 445 aa18.66■□□□□ 0.58
LMNA-223ENST00000515459 ALDH8A1Q9H2A2 487 aaPredicted RBP18.66■□□□□ 0.58
LMNA-223ENST00000515459 TTC41PQ6P2S7 1318 aa18.66■□□□□ 0.58
LMNA-223ENST00000515459 ICAM1P05362 532 aa18.65■□□□□ 0.58
LMNA-223ENST00000515459 PFKMP08237 780 aa18.65■□□□□ 0.58
LMNA-223ENST00000515459 SUPT20HL2P0C7V6 817 aa18.65■□□□□ 0.58
LMNA-223ENST00000515459 ATP2A2P16615 1042 aaKnown RBP18.65■□□□□ 0.58
LMNA-223ENST00000515459 DUSP28Q4G0W2 176 aa18.65■□□□□ 0.58
LMNA-223ENST00000515459 PURBQ96QR8 312 aaKnown RBP18.65■□□□□ 0.58
LMNA-223ENST00000515459 FSD1Q9BTV5 496 aa18.65■□□□□ 0.58
LMNA-223ENST00000515459 IL17RBQ9NRM6 502 aa18.65■□□□□ 0.58
LMNA-223ENST00000515459 POLR3EQ9NVU0 708 aa18.65■□□□□ 0.58
LMNA-223ENST00000515459 ADD3Q9UEY8 706 aaKnown RBP18.65■□□□□ 0.58
LMNA-223ENST00000515459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.65■□□□□ 0.58
LMNA-223ENST00000515459 ERC2O15083 957 aa18.64■□□□□ 0.57
LMNA-223ENST00000515459 MYOGP15173 224 aa18.64■□□□□ 0.57
LMNA-223ENST00000515459 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms