RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 YBX3P16989 372 aaKnown RBP eCLIP2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 EPHA5P54756 1037 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 PPP2R2AP63151 447 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 NMIQ13287 307 aaPredicted RBP2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 MTERF2Q49AM1 385 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 TAF7LQ5H9L4 462 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 FOXB2Q5VYV0 432 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 SHKBP1Q8TBC3 707 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 NETO1Q8TDF5 533 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 ASB11Q8WXH4 323 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 MFSD3Q96ES6 412 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 MTA3Q9BTC8 594 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 KANSL2Q9H9L4 492 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 ATG3Q9NT62 314 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 APEX2Q9UBZ4 518 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 LEMD3Q9Y2U8 911 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 NRDCO43847 1150 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 CDH24Q86UP0 819 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 TTLL11Q8NHH1 800 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 FRS2Q8WU20 508 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 SCYL1Q96KG9 808 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 MCMBPQ9BTE3 642 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 U3KQE9 123 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 PHLDB1Q86UU1 1377 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 B4E1Z4 1266 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 SRGAP3O43295 1099 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 KCNAB2Q13303 367 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 PABPC4Q13310 644 aaKnown RBP eCLIP2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 CDK5R2Q13319 367 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 EEF1DP3Q658K8 133 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 NECAB2Q7Z6G3 386 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 LILRA2Q8N149 483 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 AHI1Q8N157 1196 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 AFAP1L2Q8N4X5 818 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 TMEM52Q8NDY8 209 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 FLAD1Q8NFF5 587 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 FCRL2Q96LA5 508 aaPredicted RBP2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 CRTAC1Q9NQ79 661 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 AKT3Q9Y243 479 aa2.5□□□□□ -2.01
AC025539.1-201ENST00000515343 HMX2A2RU54 273 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 HPXP02790 462 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 FUT4P22083 530 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 CDC25BP30305 580 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 STAT3P40763 770 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 GTF2A2P52657 109 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 POU4F1Q01851 419 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 SSRP1Q08945 709 aaKnown RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 FAPQ12884 760 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 BMS1Q14692 1282 aaKnown RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 SHISA5Q8N114 240 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 FIBCD1Q8N539 461 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 BCL7CQ8WUZ0 217 aaPredicted RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 KCTD13Q8WZ19 329 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 TCTN2Q96GX1 697 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 CLUHP3Q96NS8 147 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 FCRL3Q96P31 734 aaPredicted RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 KLHL3Q9UH77 587 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 ABCC8Q09428 1581 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 ADGRL1O94910 1474 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 NOTOA8MTQ0 251 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 SMARCA5O60264 1052 aaPredicted RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 COBLO75128 1261 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 DNAJC8O75937 253 aaPredicted RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 CKMP06732 381 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 RAB6AP20340 208 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 SDHAP31040 664 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 SLC6A11P48066 632 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 SNX17Q15036 470 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 LARP1BQ659C4 914 aaKnown RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 CREB3L3Q68CJ9 461 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 DENND5AQ6IQ26 1287 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 PTCHD1Q96NR3 888 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 GPATCH2Q9NW75 528 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 ZC3H7BQ9UGR2 993 aaKnown RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 WASF3Q9UPY6 502 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 PPRC1Q5VV67 1664 aaKnown RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 A0A1W2PQ45 241 aaPredicted RBP2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 A0A1W2PQY0 241 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 FADS2P1A8MWK0 482 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 AQP7O14520 342 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 GDNFP39905 211 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 GYS2P54840 703 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 LBX2Q6XYB7 198 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 ANKS4BQ8N8V4 417 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 TBC1D32Q96NH3 1257 aa2.49□□□□□ -2.01
AC025539.1-201ENST00000515343 SHISA3A0PJX4 238 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 PCBP3P57721 371 aaKnown RBP2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 NFKBIBQ15653 356 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 PPM1KQ8N3J5 372 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 SPC25Q9HBM1 224 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 NOP58Q9Y2X3 529 aaKnown RBP2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 TARBP1Q13395 1621 aaKnown RBP2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 ABCC10Q5T3U5 1492 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 DDAH1O94760 285 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 DCAF15Q66K64 600 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 C16orf59Q7L2K0 433 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 ZNF765Q7L2R6 523 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 TMC3Q7Z5M5 1100 aa2.48□□□□□ -2.01
AC025539.1-201ENST00000515343 VSIG10LQ86VR7 867 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms